Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968827
Identifier: 123968827
GI number: 123968827
Start: 1079838
End: 1080119
Strand: Reverse
Name: 123968827
Synonym: A9601_12941
Alternate gene names: NA
Gene position: 1080119-1079838 (Counterclockwise)
Preceding gene: 123968830
Following gene: 123968826
Centisome position: 64.68
GC content: 30.5
Gene sequence:
>282_bases ATGACTATTGAAACGACTATTTTAGATTTTCAACTAAGTAATACCTATGAGGAGTATGAATCACATATGAATGCAAAAGA ACAGCAGACGATGTTTAAAGAAATGGGAGTTAAAACATTTTATATTGGTAAATCATTAGATGATCCTCAAAGGGCAACTG TAATTTTTCAAGGACCAGAAAATGTTTTATATGATATTTTTATGAATCCTGAAACAAAACCTATAGTTGAAGCTTCAGGA CATATTTATGAGGGTACAAAAATAACACGCTGGGTTTCTTAA
Upstream 100 bases:
>100_bases CATAAATGAAAATTAGTTAACACTTTGCTTAATAAAAACTAATTTTTTTAGATTAATTTTTTTGATAAAGATTTAGAATT AAAAAAATTTAATTATTCTT
Downstream 100 bases:
>100_bases AAAAATAATTCTTTAATGAATTACCAACTTTTAATTGAATCATATTCATTTGGTTCAGCCCTTACTGAGCAAGAAATAGA ACTCTTAAGTCTTGAACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MTIETTILDFQLSNTYEEYESHMNAKEQQTMFKEMGVKTFYIGKSLDDPQRATVIFQGPENVLYDIFMNPETKPIVEASG HIYEGTKITRWVS
Sequences:
>Translated_93_residues MTIETTILDFQLSNTYEEYESHMNAKEQQTMFKEMGVKTFYIGKSLDDPQRATVIFQGPENVLYDIFMNPETKPIVEASG HIYEGTKITRWVS >Mature_92_residues TIETTILDFQLSNTYEEYESHMNAKEQQTMFKEMGVKTFYIGKSLDDPQRATVIFQGPENVLYDIFMNPETKPIVEASGH IYEGTKITRWVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10803; Mature: 10672
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIETTILDFQLSNTYEEYESHMNAKEQQTMFKEMGVKTFYIGKSLDDPQRATVIFQGPE CCEEEEEEEEEECCCHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCC NVLYDIFMNPETKPIVEASGHIYEGTKITRWVS CEEEEEEECCCCCCEEECCCCEECCCEEEEECC >Mature Secondary Structure TIETTILDFQLSNTYEEYESHMNAKEQQTMFKEMGVKTFYIGKSLDDPQRATVIFQGPE CEEEEEEEEEECCCHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCC NVLYDIFMNPETKPIVEASGHIYEGTKITRWVS CEEEEEEECCCCCCEEECCCCEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA