Definition | Prochlorococcus marinus str. AS9601, complete genome. |
---|---|
Accession | NC_008816 |
Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968761
Identifier: 123968761
GI number: 123968761
Start: 1047197
End: 1047361
Strand: Reverse
Name: 123968761
Synonym: A9601_12281
Alternate gene names: NA
Gene position: 1047361-1047197 (Counterclockwise)
Preceding gene: 123968763
Following gene: 123968760
Centisome position: 62.72
GC content: 26.06
Gene sequence:
>165_bases ATGGATTATAAAAAGAAATCCCTAAATAAAATTAATCAAAAAGAAAGCTACGAGGAAATTGACACTAGGTTGGCCTCTGG GTGGTACGTTGATTCAATTGATAATAGAAAAAAGAAAAAATATAAAACAGAGAAAGTTACTTTTAAAATTTCGAAAAAAA TATAA
Upstream 100 bases:
>100_bases TTCAAAATGCTAATAAAAATTATTTACCAAACTAATCTAAAGCTCAAATGTTATTTAAATGCTATATTTTTTCTATTAAA TAAAAAAACTTTGAAGGTTT
Downstream 100 bases:
>100_bases AATTAATCCTTTTGTTATTTCATCGCAAATAACGAAATCTTGATAAAATAATTTAGTAATTTTGATTGTGCAACTAAAAA AAGTGGCACTTTTTTTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MDYKKKSLNKINQKESYEEIDTRLASGWYVDSIDNRKKKKYKTEKVTFKISKKI
Sequences:
>Translated_54_residues MDYKKKSLNKINQKESYEEIDTRLASGWYVDSIDNRKKKKYKTEKVTFKISKKI >Mature_54_residues MDYKKKSLNKINQKESYEEIDTRLASGWYVDSIDNRKKKKYKTEKVTFKISKKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6547; Mature: 6547
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYKKKSLNKINQKESYEEIDTRLASGWYVDSIDNRKKKKYKTEKVTFKISKKI CCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEECCC >Mature Secondary Structure MDYKKKSLNKINQKESYEEIDTRLASGWYVDSIDNRKKKKYKTEKVTFKISKKI CCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA