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The map label for this gene is todF [H]

Identifier: 123968725

GI number: 123968725

Start: 1007552

End: 1008484

Strand: Reverse

Name: todF [H]

Synonym: A9601_11921

Alternate gene names: 123968725

Gene position: 1008484-1007552 (Counterclockwise)

Preceding gene: 123968726

Following gene: 123968722

Centisome position: 60.39

GC content: 31.73

Gene sequence:

>933_bases
TTGAACAACAAAAAATTAAAATATAAATATTTTTTGACTAAAAACAATTTTGAAAAATTAAGTGATTTAAATGTAGAATT
TTTCGAAAGTGCCAAATTGTCACTATTAGATCCTTTAGGTCTTTATTTGGCAAATGATGTTAAGTGGATAAAACTCAACC
AAAATTGGAATTCCTTAAAATTCCCAGTAGTTATGGGAGGAAAAGGTCAACCTATACTTCTTCTACATGGCTTTGATAGT
AGTTTTTTAGAATTCAGAAGAATATATAAATCACTAAAAAGAAATTTTCAAGTTATCGTTCCTGATCTTCTGGGCTTTGG
TTTTAGTCCCAGGTACGCAACAAATGAATATAATGCCTCGAAAATAATTTCGCATTTAATTGATCTCCTTAAGACATTAA
AAATAACAAAGAATCTAAAAATTATAGGTGCCTCTATGGGAGGCTCAACAGCTTTAAAACTTGCTTATGAAATTCCTGAT
TCTATTGAAAAAATTATCCTTTTGTCCCCCGCCGGATTGTTTGGAGAACCTAAGAGTATCCCTTTTCCTCTTAACCAAAT
TGGTGCCTCATTTCTTGGAATGCCTCAGGTTAGAAAAAGTCTTTGTAGGCAAGCATTTGCTTTCCCAGATGAATGCGTTG
GTAAGATGGAAGAGCAAATTGCTTCAATTCATTTAGGTTGTAAAGGATGGAGGAATTCACTTGCATCATTTGCAAAAAGT
GGTGGGTTTGCAGGAACTCAAAAATATATCCAAAATATCCCAATTAAAACATTATGCGGAGAAAATGATCGAATTCTTGG
AAAAACAGAGCTTAAAAAAATAGGAAATATTGAAAAATTGAATTTTGTAGGGTTACAAAATTGTGGACATCTTCCGCATA
TAGATCTTCCATCATTATCTAGTAAAATAATCCAAGATTATTTTTTGGAATAA

Upstream 100 bases:

>100_bases
TTAGAGAAAATTGCTGATTTTACTTGTCGAGATAAATCTGAGATTCACTTTTTGCCTTTTGAAATTAATAAACGGGATAT
AATAGAGGTTATTTCAAATT

Downstream 100 bases:

>100_bases
AAGATTTCTTAATTAATTTAAATACTTGAGAATTATAAAAATATAATACAAAACAGATGGAGTAAAGATGTAACTGTCAA
TTCTGTCAAGAATCCCTCCA

Product: Alpha/beta hydrolase fold

Products: NA

Alternate protein names: HMSH [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNNKKLKYKYFLTKNNFEKLSDLNVEFFESAKLSLLDPLGLYLANDVKWIKLNQNWNSLKFPVVMGGKGQPILLLHGFDS
SFLEFRRIYKSLKRNFQVIVPDLLGFGFSPRYATNEYNASKIISHLIDLLKTLKITKNLKIIGASMGGSTALKLAYEIPD
SIEKIILLSPAGLFGEPKSIPFPLNQIGASFLGMPQVRKSLCRQAFAFPDECVGKMEEQIASIHLGCKGWRNSLASFAKS
GGFAGTQKYIQNIPIKTLCGENDRILGKTELKKIGNIEKLNFVGLQNCGHLPHIDLPSLSSKIIQDYFLE

Sequences:

>Translated_310_residues
MNNKKLKYKYFLTKNNFEKLSDLNVEFFESAKLSLLDPLGLYLANDVKWIKLNQNWNSLKFPVVMGGKGQPILLLHGFDS
SFLEFRRIYKSLKRNFQVIVPDLLGFGFSPRYATNEYNASKIISHLIDLLKTLKITKNLKIIGASMGGSTALKLAYEIPD
SIEKIILLSPAGLFGEPKSIPFPLNQIGASFLGMPQVRKSLCRQAFAFPDECVGKMEEQIASIHLGCKGWRNSLASFAKS
GGFAGTQKYIQNIPIKTLCGENDRILGKTELKKIGNIEKLNFVGLQNCGHLPHIDLPSLSSKIIQDYFLE
>Mature_310_residues
MNNKKLKYKYFLTKNNFEKLSDLNVEFFESAKLSLLDPLGLYLANDVKWIKLNQNWNSLKFPVVMGGKGQPILLLHGFDS
SFLEFRRIYKSLKRNFQVIVPDLLGFGFSPRYATNEYNASKIISHLIDLLKTLKITKNLKIIGASMGGSTALKLAYEIPD
SIEKIILLSPAGLFGEPKSIPFPLNQIGASFLGMPQVRKSLCRQAFAFPDECVGKMEEQIASIHLGCKGWRNSLASFAKS
GGFAGTQKYIQNIPIKTLCGENDRILGKTELKKIGNIEKLNFVGLQNCGHLPHIDLPSLSSKIIQDYFLE

Specific function: Conversion of 2-hydroxymuconic acid semialdehyde to 2- hydroxypent-2,4-dienoate [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 34753; Mature: 34753

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKKLKYKYFLTKNNFEKLSDLNVEFFESAKLSLLDPLGLYLANDVKWIKLNQNWNSLK
CCCCEEEEEEEEECCCHHHHHCCCHHHHHCCCHHHHCHHHHHHHCCEEEEEECCCCCCEE
FPVVMGGKGQPILLLHGFDSSFLEFRRIYKSLKRNFQVIVPDLLGFGFSPRYATNEYNAS
EEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCHH
KIISHLIDLLKTLKITKNLKIIGASMGGSTALKLAYEIPDSIEKIILLSPAGLFGEPKSI
HHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCC
PFPLNQIGASFLGMPQVRKSLCRQAFAFPDECVGKMEEQIASIHLGCKGWRNSLASFAKS
CCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GGFAGTQKYIQNIPIKTLCGENDRILGKTELKKIGNIEKLNFVGLQNCGHLPHIDLPSLS
CCCCHHHHHHHHCCCCEECCCCCCEECHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHH
SKIIQDYFLE
HHHHHHHHCC
>Mature Secondary Structure
MNNKKLKYKYFLTKNNFEKLSDLNVEFFESAKLSLLDPLGLYLANDVKWIKLNQNWNSLK
CCCCEEEEEEEEECCCHHHHHCCCHHHHHCCCHHHHCHHHHHHHCCEEEEEECCCCCCEE
FPVVMGGKGQPILLLHGFDSSFLEFRRIYKSLKRNFQVIVPDLLGFGFSPRYATNEYNAS
EEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCHH
KIISHLIDLLKTLKITKNLKIIGASMGGSTALKLAYEIPDSIEKIILLSPAGLFGEPKSI
HHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCC
PFPLNQIGASFLGMPQVRKSLCRQAFAFPDECVGKMEEQIASIHLGCKGWRNSLASFAKS
CCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GGFAGTQKYIQNIPIKTLCGENDRILGKTELKKIGNIEKLNFVGLQNCGHLPHIDLPSLS
CCCCHHHHHHHHCCCCEECCCCCCEECHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHH
SKIIQDYFLE
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2194577 [H]