Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968270
Identifier: 123968270
GI number: 123968270
Start: 654239
End: 655036
Strand: Reverse
Name: 123968270
Synonym: A9601_07351
Alternate gene names: NA
Gene position: 655036-654239 (Counterclockwise)
Preceding gene: 123968272
Following gene: 123968268
Centisome position: 39.23
GC content: 34.21
Gene sequence:
>798_bases ATGCCTTCAAAGATTAACTATTTATTAGGAATATTTCTATCTATATTAGTTTTAATTTCACATAAACCCGTTTTCGCTAT AAATAATCCAAATCTCTTACCAGAAGAAAAAACACCAGTAATTGATTTAGCTAAAACATTAAGCCCTAATCAGAAAAAAT CTTTAGAGGAAAAGCTCAACAATCTAGAAATTGAAAGTGGGTGGAAAATTAAATATTTATCTCAGTTTGAAAGTTCTCCT GGTAGTGCAATAAAGGACTATTGGGATTTAGATGAGACAAGTTTGTTGATAGTTGCGGATCCTAGAGGGGGAAATTTGCT GAACTTTAACGTAGGAGAGGCTTATTTTAATTTTATGCCAAGGTTATTTTGGGTTGAACTTCAAACAAGATTTGGCAACC AATACTATGTTAAAGATCATGGTGAGGATGGTGCAGTATTAGATGCAATTGATTCAGTAAAGATTTGCCTCGAAAGAGGA GGATGCCAAGTTGTCCCTGGCCTACCCAAAGAGCAATATATATGGACTTTATGTACATCGATTCTTGGAGGTTTAGTAGC AGGTTTCGCATCTGCCCCAAGAAAAGAAGGCCAAGTCATATCAATTGGATTTTTAGCTCTTCTTTCTCCTTTATGGGGAA TGTTATTTGGGATTTTTGGTTTGGCACCGATAATATCCAGAACAAATGATTTATTACCTTTATTTAAAAATGGTTTAGCT TTTACAGCCGCAGGAATTGCGGGTTATATCTTATCTCAAACATTATTTTCAAGATATGAAAAGCCCAAAAATACTTAA
Upstream 100 bases:
>100_bases TATAGTCCCACCCATTTTTATTATTTTTTTTACTAACCAATCTGGATTATTCGCGGGTAAGCTATTCATCGGCGAAAATA TAAAGAGACAAAACTTATTT
Downstream 100 bases:
>100_bases AATATGATCAGAGATATTTAATCCTAAAAAAATTTATCTTCTTCACGAATTACACCAGACTCTGAAAACCATCGATGAGA AACATGCCTTAATTGCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MPSKINYLLGIFLSILVLISHKPVFAINNPNLLPEEKTPVIDLAKTLSPNQKKSLEEKLNNLEIESGWKIKYLSQFESSP GSAIKDYWDLDETSLLIVADPRGGNLLNFNVGEAYFNFMPRLFWVELQTRFGNQYYVKDHGEDGAVLDAIDSVKICLERG GCQVVPGLPKEQYIWTLCTSILGGLVAGFASAPRKEGQVISIGFLALLSPLWGMLFGIFGLAPIISRTNDLLPLFKNGLA FTAAGIAGYILSQTLFSRYEKPKNT
Sequences:
>Translated_265_residues MPSKINYLLGIFLSILVLISHKPVFAINNPNLLPEEKTPVIDLAKTLSPNQKKSLEEKLNNLEIESGWKIKYLSQFESSP GSAIKDYWDLDETSLLIVADPRGGNLLNFNVGEAYFNFMPRLFWVELQTRFGNQYYVKDHGEDGAVLDAIDSVKICLERG GCQVVPGLPKEQYIWTLCTSILGGLVAGFASAPRKEGQVISIGFLALLSPLWGMLFGIFGLAPIISRTNDLLPLFKNGLA FTAAGIAGYILSQTLFSRYEKPKNT >Mature_264_residues PSKINYLLGIFLSILVLISHKPVFAINNPNLLPEEKTPVIDLAKTLSPNQKKSLEEKLNNLEIESGWKIKYLSQFESSPG SAIKDYWDLDETSLLIVADPRGGNLLNFNVGEAYFNFMPRLFWVELQTRFGNQYYVKDHGEDGAVLDAIDSVKICLERGG CQVVPGLPKEQYIWTLCTSILGGLVAGFASAPRKEGQVISIGFLALLSPLWGMLFGIFGLAPIISRTNDLLPLFKNGLAF TAAGIAGYILSQTLFSRYEKPKNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29333; Mature: 29202
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKINYLLGIFLSILVLISHKPVFAINNPNLLPEEKTPVIDLAKTLSPNQKKSLEEKLN CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHH NLEIESGWKIKYLSQFESSPGSAIKDYWDLDETSLLIVADPRGGNLLNFNVGEAYFNFMP CCCCCCCCCEEEHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEEECHHHHHHHHHH RLFWVELQTRFGNQYYVKDHGEDGAVLDAIDSVKICLERGGCQVVPGLPKEQYIWTLCTS HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHH ILGGLVAGFASAPRKEGQVISIGFLALLSPLWGMLFGIFGLAPIISRTNDLLPLFKNGLA HHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHH FTAAGIAGYILSQTLFSRYEKPKNT HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PSKINYLLGIFLSILVLISHKPVFAINNPNLLPEEKTPVIDLAKTLSPNQKKSLEEKLN CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHH NLEIESGWKIKYLSQFESSPGSAIKDYWDLDETSLLIVADPRGGNLLNFNVGEAYFNFMP CCCCCCCCCEEEHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEEECHHHHHHHHHH RLFWVELQTRFGNQYYVKDHGEDGAVLDAIDSVKICLERGGCQVVPGLPKEQYIWTLCTS HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHH ILGGLVAGFASAPRKEGQVISIGFLALLSPLWGMLFGIFGLAPIISRTNDLLPLFKNGLA HHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHH FTAAGIAGYILSQTLFSRYEKPKNT HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA