Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968250
Identifier: 123968250
GI number: 123968250
Start: 634511
End: 634768
Strand: Reverse
Name: 123968250
Synonym: A9601_07151
Alternate gene names: NA
Gene position: 634768-634511 (Counterclockwise)
Preceding gene: 123968251
Following gene: 123968248
Centisome position: 38.01
GC content: 29.84
Gene sequence:
>258_bases ATGACATTAAGCTTAAATATTGGGAACTTGTTTAATGATTCCTCCAGTCATGCATTGGTGGATGAGTTAAGAAAAAGAAC ATCAGAAGAGGATATCTTAGATTTTGAGGAAAAATTTAACTCCAAAAACGAAAAAAATCTACACGTATATATATGTAGAT TTCTAAAAAATAGATCAATATCCAGAGGGGTAGCCTCTAGATGGTTAATAACCATAATTGAAAACAAAGCATCAAAAATT GATGCATTGCAAAAATAA
Upstream 100 bases:
>100_bases CCAAAAGATTAAATTTTGAATAATTTGTAAATAAAAAATATAAATTAGTTTTTAAAAATTTAATTTATGGCTACCTCTTA AATAGGGACATAAATTATTT
Downstream 100 bases:
>100_bases AATATTTAGGTCAGCCCTGATAGTTTCCATAGAGCAATTCCAAAAATTGAGAATCCCATAATAAAAGTAAAAGCCAAAGC ATTTACCAATTGGACCTTAT
Product: RNA recognition motif-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MTLSLNIGNLFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHVYICRFLKNRSISRGVASRWLITIIENKASKI DALQK
Sequences:
>Translated_85_residues MTLSLNIGNLFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHVYICRFLKNRSISRGVASRWLITIIENKASKI DALQK >Mature_84_residues TLSLNIGNLFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHVYICRFLKNRSISRGVASRWLITIIENKASKID ALQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9854; Mature: 9723
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSLNIGNLFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHVYICRFLKNRSI CEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC SRGVASRWLITIIENKASKIDALQK CCHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure TLSLNIGNLFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHVYICRFLKNRSI EEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC SRGVASRWLITIIENKASKIDALQK CCHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA