Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968229
Identifier: 123968229
GI number: 123968229
Start: 616131
End: 617063
Strand: Reverse
Name: 123968229
Synonym: A9601_06941
Alternate gene names: NA
Gene position: 617063-616131 (Counterclockwise)
Preceding gene: 123968230
Following gene: 123968227
Centisome position: 36.95
GC content: 29.8
Gene sequence:
>933_bases ATGAAAGAAAAATTCCCCTCAATATATAAAGAACCTATAGAAACATTGCAAATCAATATAGGTTATAAATGCAATCAGGC TTGTAAGCATTGTCATGTTAATTCAAGTCCTCTGAGGACTGAAAAGATGTCCAATGAAATAATATCTCTCATTCCAAAAA TAATTGATAAGTACAAAATCAAGACTTTAGATATAACAGGTGGCGCGCCAGAACTTCACCCAGAATTTAAAAACCTAATA GCTAGTTTGAGCACAAAACAAGTTGATATTATTGATAGATGCAATTTAACAATTTTCTTTGAAGAAGGTTATGAAGATCT TCCTCAATTTCTTGCAAAGAATAAAGTAATAGTCACTGCTTCGCTGCCGTGTTATGAAAAAAATAATGTTGAGATTCAAA GGGGTCTTGGGGTTTTTGAAAAAAGTATTAATGCTATAAAAATTCTTAATAATTTAGGCTATGGAAAGAAAGAAACTGGA TTGCAATTAAATCTTGTTTACAATCCTGTAAGCCCTATTCTTCCTCCTTCTCAGGAAATATTGGAAAAAAATTATAAAAA AATACTATTCGAAAAATATAATATTGTTTTTAATAATTTATACACAATAACTAATATGCCAATAAATAGATATGAAGAAT CTCTAAGAAGAGAAGGGAAACTAAATACTTATTACAAATTACTAAAAGAAAATTTTAATGAAAATAATTTAGAAAATCTT ATGTGTAAAAAAACTATTAGCGTAAATTGGTTAGGAGAAATTTATGATTGTGACTTTAACCAACAGATCAATTTCCGAGA AAATAAAGGGCCAAAGACACTTTTTGATCTATTGGATGAATCATTTACTTTTGACTACGGGGTAGCTGTTAAAGAGCATT GTTTTGCTTGCACTGCAGGTGCAGGGTCAAGTTGTGGAGGGACTTTAAGTTAA
Upstream 100 bases:
>100_bases TATATAAGTTGGTTTATTGAACTTGCTAATAAGAGATCAAACTTTAAAAAAAGTAGTTGACTTTTGAATTTTCAAATGAC AATTTATAAATAATAGATTT
Downstream 100 bases:
>100_bases AACCTACTAAATGCAATTAGGACAAATAGCTCTTACATTTAAAGAGGATTCAATTAGTTTAAAACCATTAACTTTAGCTG CGACTTTGCCTGCCTCTAAA
Product: Fe-S oxidoreductases
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKEKFPSIYKEPIETLQINIGYKCNQACKHCHVNSSPLRTEKMSNEIISLIPKIIDKYKIKTLDITGGAPELHPEFKNLI ASLSTKQVDIIDRCNLTIFFEEGYEDLPQFLAKNKVIVTASLPCYEKNNVEIQRGLGVFEKSINAIKILNNLGYGKKETG LQLNLVYNPVSPILPPSQEILEKNYKKILFEKYNIVFNNLYTITNMPINRYEESLRREGKLNTYYKLLKENFNENNLENL MCKKTISVNWLGEIYDCDFNQQINFRENKGPKTLFDLLDESFTFDYGVAVKEHCFACTAGAGSSCGGTLS
Sequences:
>Translated_310_residues MKEKFPSIYKEPIETLQINIGYKCNQACKHCHVNSSPLRTEKMSNEIISLIPKIIDKYKIKTLDITGGAPELHPEFKNLI ASLSTKQVDIIDRCNLTIFFEEGYEDLPQFLAKNKVIVTASLPCYEKNNVEIQRGLGVFEKSINAIKILNNLGYGKKETG LQLNLVYNPVSPILPPSQEILEKNYKKILFEKYNIVFNNLYTITNMPINRYEESLRREGKLNTYYKLLKENFNENNLENL MCKKTISVNWLGEIYDCDFNQQINFRENKGPKTLFDLLDESFTFDYGVAVKEHCFACTAGAGSSCGGTLS >Mature_310_residues MKEKFPSIYKEPIETLQINIGYKCNQACKHCHVNSSPLRTEKMSNEIISLIPKIIDKYKIKTLDITGGAPELHPEFKNLI ASLSTKQVDIIDRCNLTIFFEEGYEDLPQFLAKNKVIVTASLPCYEKNNVEIQRGLGVFEKSINAIKILNNLGYGKKETG LQLNLVYNPVSPILPPSQEILEKNYKKILFEKYNIVFNNLYTITNMPINRYEESLRREGKLNTYYKLLKENFNENNLENL MCKKTISVNWLGEIYDCDFNQQINFRENKGPKTLFDLLDESFTFDYGVAVKEHCFACTAGAGSSCGGTLS
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35475; Mature: 35475
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKFPSIYKEPIETLQINIGYKCNQACKHCHVNSSPLRTEKMSNEIISLIPKIIDKYKI CCCCCHHHHHCHHHEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE KTLDITGGAPELHPEFKNLIASLSTKQVDIIDRCNLTIFFEEGYEDLPQFLAKNKVIVTA EEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEE SLPCYEKNNVEIQRGLGVFEKSINAIKILNNLGYGKKETGLQLNLVYNPVSPILPPSQEI ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHH LEKNYKKILFEKYNIVFNNLYTITNMPINRYEESLRREGKLNTYYKLLKENFNENNLENL HHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH MCKKTISVNWLGEIYDCDFNQQINFRENKGPKTLFDLLDESFTFDYGVAVKEHCFACTAG HHHHHCCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHEEEECC AGSSCGGTLS CCCCCCCCCC >Mature Secondary Structure MKEKFPSIYKEPIETLQINIGYKCNQACKHCHVNSSPLRTEKMSNEIISLIPKIIDKYKI CCCCCHHHHHCHHHEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE KTLDITGGAPELHPEFKNLIASLSTKQVDIIDRCNLTIFFEEGYEDLPQFLAKNKVIVTA EEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEE SLPCYEKNNVEIQRGLGVFEKSINAIKILNNLGYGKKETGLQLNLVYNPVSPILPPSQEI ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHH LEKNYKKILFEKYNIVFNNLYTITNMPINRYEESLRREGKLNTYYKLLKENFNENNLENL HHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH MCKKTISVNWLGEIYDCDFNQQINFRENKGPKTLFDLLDESFTFDYGVAVKEHCFACTAG HHHHHCCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHEEEECC AGSSCGGTLS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA