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The map label for this gene is crtL [H]

Identifier: 123968224

GI number: 123968224

Start: 611395

End: 612663

Strand: Reverse

Name: crtL [H]

Synonym: A9601_06891

Alternate gene names: 123968224

Gene position: 612663-611395 (Counterclockwise)

Preceding gene: 123968226

Following gene: 123968223

Centisome position: 36.69

GC content: 35.07

Gene sequence:

>1269_bases
ATGCCAGATGTTCTTGTTTTGGGTGCAGGGCCTGCCGGTATGGCTATTGCCTCAGCTTTAGGGAAGGAAAAATTAGATGT
TGAAGTGCTTTCTCCAAATGGACCAGATGAACCTTGGCCAAATACATATGGTATTTGGGGGAAAGAAGTTGATCAACTCG
GGCTTCAGGATTTACTTGAATATAGATGGAAGAATACTGTAAGTTTTTTTGGGCATGGCGCTTTAGAAGAACAGGACGAC
GAGAATAAAGCCACGGAACATTCACTAGATTATGGACTATTTGATAAGAAGAAACTCCATAATTATTGGTTTAACGAATG
CAACAAGTCTTTTATTAAATGGCATCAAGGTTTTGCAAACAAAATACATTTTGAAAAATACAAAAGTACAGTAACTACAA
AAGATGGAAAAACTTACTCTGCAAGATTAGTAGTAGATGCAACAGGCTATGATCCTGTTTTTCTTAAATTAAAATCCTGT
GGTCCCTTAGCAGTCCAAACTTGTTATGGGATAGTAGGAAATTTTAGTAAACCTCCACTTAAGAAAGGGCAGTTTGTATT
AATGGACTATAGAAATGATCATCTTAACGATGAGCAAAAAAAAGAACCGCCAACTTTTCTTTATGCAATGGATATGGGGG
ATGGGAAATATTTTCTTGAAGAGACATCTCTTGGTTTGGTAAATCCTCTAACAATGGAAAATTTAAAAGAGAGACTAGAG
AAGAGGCTTTCTTATCGAAATATATCAATCACAAGCATGCAGCACGAAGAGCTTGGCTTATTTCTTCCTATGAATATGCC
AATCCCAGATTTCAAACAACAAATACTTGGATATGGTGGTGCTGCTTCAATGGTACATCCTGCATCTGGATATTTAATTG
GTAATGTTTTAAGAAGAGCTCCACTTGTCGCAAAGGCAGTCTCAGAAGCAATTAAAAACAAAAATCTAAGTACCTATCAT
ATTGCTAGAAAAGGTTGGGAAACTTTATGGTCAAAAGAATTAATTAGGAAGAAATCACTTTACCAATTTGGATTAGAAAA
ACTCATGAGGTTTGATGAGAAACTATTGAGAGAATTTTTTGGCAGTTTTTTCCAACTACCTAAAAATCAATGGTATGGTT
TTCTAACTGATACTCTTTCTTTAAAAGAGATTGTATATGCTATGTGCGTAATGTTTATAAAGGCTCCATGGAGTGTAAAG
AAAGGTCTTATGATTATGCATGGAAGAGAATTTAAAATGTTACTTAGGATAATATTTCCAAACATATAG

Upstream 100 bases:

>100_bases
ATAAGGATTGGATGAAAAATATAATTCTAGGCTCAGAAGTAATTATTTGTTCCATATATTTTTTTAATCATAAGATTTAT
ATTTAATGTCAAAAGAAAAT

Downstream 100 bases:

>100_bases
TTAAAAAATGAGAACCATATTAATAAGTGGAGCCAGTAGAGGTATTGGACTAAATATTGCACATAAAGAATTAAAAGAAG
GCAATAGAATTAGTGTTGGC

Product: putative lycopene epsilon cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MPDVLVLGAGPAGMAIASALGKEKLDVEVLSPNGPDEPWPNTYGIWGKEVDQLGLQDLLEYRWKNTVSFFGHGALEEQDD
ENKATEHSLDYGLFDKKKLHNYWFNECNKSFIKWHQGFANKIHFEKYKSTVTTKDGKTYSARLVVDATGYDPVFLKLKSC
GPLAVQTCYGIVGNFSKPPLKKGQFVLMDYRNDHLNDEQKKEPPTFLYAMDMGDGKYFLEETSLGLVNPLTMENLKERLE
KRLSYRNISITSMQHEELGLFLPMNMPIPDFKQQILGYGGAASMVHPASGYLIGNVLRRAPLVAKAVSEAIKNKNLSTYH
IARKGWETLWSKELIRKKSLYQFGLEKLMRFDEKLLREFFGSFFQLPKNQWYGFLTDTLSLKEIVYAMCVMFIKAPWSVK
KGLMIMHGREFKMLLRIIFPNI

Sequences:

>Translated_422_residues
MPDVLVLGAGPAGMAIASALGKEKLDVEVLSPNGPDEPWPNTYGIWGKEVDQLGLQDLLEYRWKNTVSFFGHGALEEQDD
ENKATEHSLDYGLFDKKKLHNYWFNECNKSFIKWHQGFANKIHFEKYKSTVTTKDGKTYSARLVVDATGYDPVFLKLKSC
GPLAVQTCYGIVGNFSKPPLKKGQFVLMDYRNDHLNDEQKKEPPTFLYAMDMGDGKYFLEETSLGLVNPLTMENLKERLE
KRLSYRNISITSMQHEELGLFLPMNMPIPDFKQQILGYGGAASMVHPASGYLIGNVLRRAPLVAKAVSEAIKNKNLSTYH
IARKGWETLWSKELIRKKSLYQFGLEKLMRFDEKLLREFFGSFFQLPKNQWYGFLTDTLSLKEIVYAMCVMFIKAPWSVK
KGLMIMHGREFKMLLRIIFPNI
>Mature_421_residues
PDVLVLGAGPAGMAIASALGKEKLDVEVLSPNGPDEPWPNTYGIWGKEVDQLGLQDLLEYRWKNTVSFFGHGALEEQDDE
NKATEHSLDYGLFDKKKLHNYWFNECNKSFIKWHQGFANKIHFEKYKSTVTTKDGKTYSARLVVDATGYDPVFLKLKSCG
PLAVQTCYGIVGNFSKPPLKKGQFVLMDYRNDHLNDEQKKEPPTFLYAMDMGDGKYFLEETSLGLVNPLTMENLKERLEK
RLSYRNISITSMQHEELGLFLPMNMPIPDFKQQILGYGGAASMVHPASGYLIGNVLRRAPLVAKAVSEAIKNKNLSTYHI
ARKGWETLWSKELIRKKSLYQFGLEKLMRFDEKLLREFFGSFFQLPKNQWYGFLTDTLSLKEIVYAMCVMFIKAPWSVKK
GLMIMHGREFKMLLRIIFPNI

Specific function: Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lycopene cyclase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010108
- InterPro:   IPR008671
- InterPro:   IPR000103 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 48364; Mature: 48232

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDVLVLGAGPAGMAIASALGKEKLDVEVLSPNGPDEPWPNTYGIWGKEVDQLGLQDLLE
CCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YRWKNTVSFFGHGALEEQDDENKATEHSLDYGLFDKKKLHNYWFNECNKSFIKWHQGFAN
HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KIHFEKYKSTVTTKDGKTYSARLVVDATGYDPVFLKLKSCGPLAVQTCYGIVGNFSKPPL
HHHHHHHHHHEECCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC
KKGQFVLMDYRNDHLNDEQKKEPPTFLYAMDMGDGKYFLEETSLGLVNPLTMENLKERLE
CCCCEEEEECCCCCCCCHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH
KRLSYRNISITSMQHEELGLFLPMNMPIPDFKQQILGYGGAASMVHPASGYLIGNVLRRA
HHHHHCCCEEEEECHHHCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
PLVAKAVSEAIKNKNLSTYHIARKGWETLWSKELIRKKSLYQFGLEKLMRFDEKLLREFF
HHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSFFQLPKNQWYGFLTDTLSLKEIVYAMCVMFIKAPWSVKKGLMIMHGREFKMLLRIIFP
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECHHHHHHHHHHCC
NI
CC
>Mature Secondary Structure 
PDVLVLGAGPAGMAIASALGKEKLDVEVLSPNGPDEPWPNTYGIWGKEVDQLGLQDLLE
CCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YRWKNTVSFFGHGALEEQDDENKATEHSLDYGLFDKKKLHNYWFNECNKSFIKWHQGFAN
HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KIHFEKYKSTVTTKDGKTYSARLVVDATGYDPVFLKLKSCGPLAVQTCYGIVGNFSKPPL
HHHHHHHHHHEECCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC
KKGQFVLMDYRNDHLNDEQKKEPPTFLYAMDMGDGKYFLEETSLGLVNPLTMENLKERLE
CCCCEEEEECCCCCCCCHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH
KRLSYRNISITSMQHEELGLFLPMNMPIPDFKQQILGYGGAASMVHPASGYLIGNVLRRA
HHHHHCCCEEEEECHHHCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
PLVAKAVSEAIKNKNLSTYHIARKGWETLWSKELIRKKSLYQFGLEKLMRFDEKLLREFF
HHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSFFQLPKNQWYGFLTDTLSLKEIVYAMCVMFIKAPWSVKKGLMIMHGREFKMLLRIIFP
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECHHHHHHHHHHCC
NI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7919981 [H]