Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is mas1 [H]
Identifier: 123968223
GI number: 123968223
Start: 610680
End: 611387
Strand: Reverse
Name: mas1 [H]
Synonym: A9601_06881
Alternate gene names: 123968223
Gene position: 611387-610680 (Counterclockwise)
Preceding gene: 123968224
Following gene: 123968221
Centisome position: 36.61
GC content: 31.21
Gene sequence:
>708_bases ATGAGAACCATATTAATAAGTGGAGCCAGTAGAGGTATTGGACTAAATATTGCACATAAAGAATTAAAAGAAGGCAATAG AATTAGTGTTGGCATAAGAGATTTAGAATCATTAAAAGGAAGTGCTATTGATCCAGAAAAATGGCCAGAAGGGAAAATTA TAATCAACCACTATGATGCTTTAAAAAAAATTACAGCCGAAAATTGGATAAAGAATACTGTAGATGAATTTGGAGGATTT GATTCAATAATAAATTGTTCTGGAGTATTATCGAAAGTTCCTTTCTTATACAAAGATGGTGATGAAGAAGATATTTTAAA TACATTAAATATAAATTTTTTGGCAATTTGGCATTTATGTAGGCTTTCTTGGGATCATTTATGTACCTCTGGAAGAGGAA GAATTATTGTTTTAGTTTCAATGAGTGGGAAAAGATCGAAAGGTGATTTAGCCGCTTATTCTTCTTCAAAGTTTGCTTTG ATGGGATTATGCCAAACGATGAAAAATAAAGGTTGGGATAAAAATATAAGAATTACTGCAATTTGCCCAAGCTGGGTTAA TACAAAAATGGCCCAAAATATCTCTTCTTTAGACAAATCAAGAATGACACAACCTGAAGATATTGCTGAAATATGCTCAA CTATTCTTAAGTTACCTACCCAATCAGTTCCATTTGAAATCGCCTTAAATTGTAACTATGAAATTTAA
Upstream 100 bases:
>100_bases ATAAAGGCTCCATGGAGTGTAAAGAAAGGTCTTATGATTATGCATGGAAGAGAATTTAAAATGTTACTTAGGATAATATT TCCAAACATATAGTTAAAAA
Downstream 100 bases:
>100_bases CCTAAATTAAAAATTAAGTAAGCCATTGAAAGCATTGCAATTGCAATAAATAAACCTTTTATTCGATTAGTTAACAATGA AAAAAGAGATAAATCTTCAG
Product: short-chain dehydrogenase/reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRTILISGASRGIGLNIAHKELKEGNRISVGIRDLESLKGSAIDPEKWPEGKIIINHYDALKKITAENWIKNTVDEFGGF DSIINCSGVLSKVPFLYKDGDEEDILNTLNINFLAIWHLCRLSWDHLCTSGRGRIIVLVSMSGKRSKGDLAAYSSSKFAL MGLCQTMKNKGWDKNIRITAICPSWVNTKMAQNISSLDKSRMTQPEDIAEICSTILKLPTQSVPFEIALNCNYEI
Sequences:
>Translated_235_residues MRTILISGASRGIGLNIAHKELKEGNRISVGIRDLESLKGSAIDPEKWPEGKIIINHYDALKKITAENWIKNTVDEFGGF DSIINCSGVLSKVPFLYKDGDEEDILNTLNINFLAIWHLCRLSWDHLCTSGRGRIIVLVSMSGKRSKGDLAAYSSSKFAL MGLCQTMKNKGWDKNIRITAICPSWVNTKMAQNISSLDKSRMTQPEDIAEICSTILKLPTQSVPFEIALNCNYEI >Mature_235_residues MRTILISGASRGIGLNIAHKELKEGNRISVGIRDLESLKGSAIDPEKWPEGKIIINHYDALKKITAENWIKNTVDEFGGF DSIINCSGVLSKVPFLYKDGDEEDILNTLNINFLAIWHLCRLSWDHLCTSGRGRIIVLVSMSGKRSKGDLAAYSSSKFAL MGLCQTMKNKGWDKNIRITAICPSWVNTKMAQNISSLDKSRMTQPEDIAEICSTILKLPTQSVPFEIALNCNYEI
Specific function: Reduces deoxy-fructosyl-glutamine to mannopine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4504505, Length=219, Percent_Identity=26.027397260274, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI40254992, Length=193, Percent_Identity=24.8704663212435, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI87082100, Length=233, Percent_Identity=27.0386266094421, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787335, Length=194, Percent_Identity=26.8041237113402, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17561402, Length=226, Percent_Identity=26.9911504424779, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71994600, Length=240, Percent_Identity=25.8333333333333, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17568967, Length=216, Percent_Identity=24.0740740740741, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=220, Percent_Identity=26.8181818181818, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI21356301, Length=196, Percent_Identity=24.4897959183673, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24644339, Length=241, Percent_Identity=24.0663900414938, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI21358495, Length=195, Percent_Identity=22.5641025641026, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR013078 - InterPro: IPR015845 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short; PF00300 PGAM [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26178; Mature: 26178
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTILISGASRGIGLNIAHKELKEGNRISVGIRDLESLKGSAIDPEKWPEGKIIINHYDA CCEEEEECCCCCCCEEEEHHHHHCCCEEEEEHHHHHHHCCCCCCCCCCCCCCEEEEHHHH LKKITAENWIKNTVDEFGGFDSIINCSGVLSKVPFLYKDGDEEDILNTLNINFLAIWHLC HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCHHHHHHHHCCHHHHHHHHH RLSWDHLCTSGRGRIIVLVSMSGKRSKGDLAAYSSSKFALMGLCQTMKNKGWDKNIRITA HHCHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEE ICPSWVNTKMAQNISSLDKSRMTQPEDIAEICSTILKLPTQSVPFEIALNCNYEI ECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC >Mature Secondary Structure MRTILISGASRGIGLNIAHKELKEGNRISVGIRDLESLKGSAIDPEKWPEGKIIINHYDA CCEEEEECCCCCCCEEEEHHHHHCCCEEEEEHHHHHHHCCCCCCCCCCCCCCEEEEHHHH LKKITAENWIKNTVDEFGGFDSIINCSGVLSKVPFLYKDGDEEDILNTLNINFLAIWHLC HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCHHHHHHHHCCHHHHHHHHH RLSWDHLCTSGRGRIIVLVSMSGKRSKGDLAAYSSSKFALMGLCQTMKNKGWDKNIRITA HHCHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEE ICPSWVNTKMAQNISSLDKSRMTQPEDIAEICSTILKLPTQSVPFEIALNCNYEI ECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1909028 [H]