Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968211
Identifier: 123968211
GI number: 123968211
Start: 601617
End: 602339
Strand: Reverse
Name: 123968211
Synonym: A9601_06761
Alternate gene names: NA
Gene position: 602339-601617 (Counterclockwise)
Preceding gene: 123968213
Following gene: 123968204
Centisome position: 36.07
GC content: 28.63
Gene sequence:
>723_bases ATGACTTTTACAAAATTTCAATATAACAATTTCTGTTATTGGCCTTCAAATCCAAAAAAAATTGTTGAATTTATTGGTGG AAGTTATTTAGCTTCTAAGCCAGATTTAACTTATAGAAGATTCATAGAGAGTTTAATTAATAAAAATTATGCAGTACATG CATATAAATACACACCACAATTTGATCACCAACAACTTGCTATCAAAGCATGGAAAGATTTTAAGAATTGCCGAATATCT TTATCCAAGAGAATAGGAGCATCAATTCCTTCAATAAGAATTGGTCATAGCCTAGGATGTAAACTTCATTTAATTTCTCC TGATGGCGGAAGAAATTGCGAAAAATTCATATCTATTAGTTTTAATAATTTTAGTGCTAACAAATCAATTCCATTATTGA AACAAATTTCTCAAAAATTAGAATTCAACAGTGAATTTAGCCCAAGTCCTGAAAGAACTTTGCGATTAATTGAAAAAACA TATAATCAAAAAAATAACTTCCTAATAAAATTCAACCAAGACGAATTAGATCAAACAGATAACTTATTTTCTTGTCTGAA AGCAAGAAAAGAAGATAATTCTAAGGGGGTAATGCTAAAAGGTACACACACTATAATTGCAAGCGCAGGACTAAGAGAAA ATTTTTTGGGAGACTGGGCTGATGATGAATTCAAAAGAAATACTATAAAAAAAATTTCCAATTTAATTGATGAATCTATT TAG
Upstream 100 bases:
>100_bases TCATTTATCTTGACGCATTTAATAAATATTTCTTTTAAATTAATATAAATTAAAAAACAGCCTAGAAAATATTTTTTGAA ACATTTTTAGCTTATGAAAG
Downstream 100 bases:
>100_bases GATAATTCTTTCAGCTTTTCCAAAACAGAACTATCTTCAAGAGTGCTAATATCACCACTAATTTTTTCTCCAGCAGCCAA AGATCTTAAAATTCGCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MTFTKFQYNNFCYWPSNPKKIVEFIGGSYLASKPDLTYRRFIESLINKNYAVHAYKYTPQFDHQQLAIKAWKDFKNCRIS LSKRIGASIPSIRIGHSLGCKLHLISPDGGRNCEKFISISFNNFSANKSIPLLKQISQKLEFNSEFSPSPERTLRLIEKT YNQKNNFLIKFNQDELDQTDNLFSCLKARKEDNSKGVMLKGTHTIIASAGLRENFLGDWADDEFKRNTIKKISNLIDESI
Sequences:
>Translated_240_residues MTFTKFQYNNFCYWPSNPKKIVEFIGGSYLASKPDLTYRRFIESLINKNYAVHAYKYTPQFDHQQLAIKAWKDFKNCRIS LSKRIGASIPSIRIGHSLGCKLHLISPDGGRNCEKFISISFNNFSANKSIPLLKQISQKLEFNSEFSPSPERTLRLIEKT YNQKNNFLIKFNQDELDQTDNLFSCLKARKEDNSKGVMLKGTHTIIASAGLRENFLGDWADDEFKRNTIKKISNLIDESI >Mature_239_residues TFTKFQYNNFCYWPSNPKKIVEFIGGSYLASKPDLTYRRFIESLINKNYAVHAYKYTPQFDHQQLAIKAWKDFKNCRISL SKRIGASIPSIRIGHSLGCKLHLISPDGGRNCEKFISISFNNFSANKSIPLLKQISQKLEFNSEFSPSPERTLRLIEKTY NQKNNFLIKFNQDELDQTDNLFSCLKARKEDNSKGVMLKGTHTIIASAGLRENFLGDWADDEFKRNTIKKISNLIDESI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27710; Mature: 27579
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTKFQYNNFCYWPSNPKKIVEFIGGSYLASKPDLTYRRFIESLINKNYAVHAYKYTPQ CCCEEEECCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCC FDHQQLAIKAWKDFKNCRISLSKRIGASIPSIRIGHSLGCKLHLISPDGGRNCEKFISIS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCEEEEE FNNFSANKSIPLLKQISQKLEFNSEFSPSPERTLRLIEKTYNQKNNFLIKFNQDELDQTD ECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHCHHH NLFSCLKARKEDNSKGVMLKGTHTIIASAGLRENFLGDWADDEFKRNTIKKISNLIDESI HHHHHHHHHCCCCCCCEEEECCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TFTKFQYNNFCYWPSNPKKIVEFIGGSYLASKPDLTYRRFIESLINKNYAVHAYKYTPQ CCEEEECCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCC FDHQQLAIKAWKDFKNCRISLSKRIGASIPSIRIGHSLGCKLHLISPDGGRNCEKFISIS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCEEEEE FNNFSANKSIPLLKQISQKLEFNSEFSPSPERTLRLIEKTYNQKNNFLIKFNQDELDQTD ECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHCHHH NLFSCLKARKEDNSKGVMLKGTHTIIASAGLRENFLGDWADDEFKRNTIKKISNLIDESI HHHHHHHHHCCCCCCCEEEECCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA