Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968051
Identifier: 123968051
GI number: 123968051
Start: 448771
End: 449262
Strand: Reverse
Name: 123968051
Synonym: A9601_05141
Alternate gene names: NA
Gene position: 449262-448771 (Counterclockwise)
Preceding gene: 123968052
Following gene: 123968049
Centisome position: 26.9
GC content: 29.67
Gene sequence:
>492_bases TTGAAAGAAATAAAATCTGTTTCGGGAATCAACAATAAAGGAGGAGATTCCTCTTTAAAGAGAATCGGAAATTTCATAAA AGAGGCTAGGTTAAGTAAAAATCAATCAATTGAAGAACTGGCTTCAGATTTAAAAATTGGAGCTCATCAACTTGAAGCCA TAGAGGAAGGTAATGAAGAAAAACTACCTGAAAAAGTATTTATCAAAGCAATGATTAGACGGATTTCACAGAAGCTAAAA CTTGATACAGAATTTTTAATGGATGAATTCAAGACAGAGAGGAAAGAAGTGAAAATTGAAGAAATAGTTGAAGAAGTTTC CAAAAAAAATTATAAATCTAAGCAATCTAAGAATTTTAATCCACTAGGATTCCTAATATTTATTTTAATTTCAGGCTTTC TCGGACTAATCGCCTCGTCCTTAATTTTCAATTTATTTTCAGATTCTTCTCAGAATCAAACTCCAAAACAAGAACTTATT AAAAAAAACTAA
Upstream 100 bases:
>100_bases AATCTTTATAATCCATCTTATAAGCATCTCTTTAGGAATAAATAATCTTAAAGTTGATAGAAAAATATTAATTACTATAA TTAGTAAAAATTAATTTGCT
Downstream 100 bases:
>100_bases ATAACTTTTAATTCCAAATTCTTTAGTTCTTTTATTACATTACGGCATAATCCTAAGTTCCATTTTTCAAGAAGAAGATC ATGGTTTCTATCTAAAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKEIKSVSGINNKGGDSSLKRIGNFIKEARLSKNQSIEELASDLKIGAHQLEAIEEGNEEKLPEKVFIKAMIRRISQKLK LDTEFLMDEFKTERKEVKIEEIVEEVSKKNYKSKQSKNFNPLGFLIFILISGFLGLIASSLIFNLFSDSSQNQTPKQELI KKN
Sequences:
>Translated_163_residues MKEIKSVSGINNKGGDSSLKRIGNFIKEARLSKNQSIEELASDLKIGAHQLEAIEEGNEEKLPEKVFIKAMIRRISQKLK LDTEFLMDEFKTERKEVKIEEIVEEVSKKNYKSKQSKNFNPLGFLIFILISGFLGLIASSLIFNLFSDSSQNQTPKQELI KKN >Mature_163_residues MKEIKSVSGINNKGGDSSLKRIGNFIKEARLSKNQSIEELASDLKIGAHQLEAIEEGNEEKLPEKVFIKAMIRRISQKLK LDTEFLMDEFKTERKEVKIEEIVEEVSKKNYKSKQSKNFNPLGFLIFILISGFLGLIASSLIFNLFSDSSQNQTPKQELI KKN
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18565; Mature: 18565
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIKSVSGINNKGGDSSLKRIGNFIKEARLSKNQSIEELASDLKIGAHQLEAIEEGNEE CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH KLPEKVFIKAMIRRISQKLKLDTEFLMDEFKTERKEVKIEEIVEEVSKKNYKSKQSKNFN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLGFLIFILISGFLGLIASSLIFNLFSDSSQNQTPKQELIKKN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC >Mature Secondary Structure MKEIKSVSGINNKGGDSSLKRIGNFIKEARLSKNQSIEELASDLKIGAHQLEAIEEGNEE CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH KLPEKVFIKAMIRRISQKLKLDTEFLMDEFKTERKEVKIEEIVEEVSKKNYKSKQSKNFN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLGFLIFILISGFLGLIASSLIFNLFSDSSQNQTPKQELIKKN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA