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The map label for this gene is ldcA [C]

Identifier: 123968048

GI number: 123968048

Start: 445287

End: 446156

Strand: Reverse

Name: ldcA [C]

Synonym: A9601_05111

Alternate gene names: 123968048

Gene position: 446156-445287 (Counterclockwise)

Preceding gene: 123968049

Following gene: 123968046

Centisome position: 26.72

GC content: 33.1

Gene sequence:

>870_bases
ATGGTTTCCAGATTACAAAAAGGTGATCTAATAGATATTTTAGCTCCAGGCTCTTTTATTGATGAAGAGGAAAATTTTCA
AAAAGGCATAGAAATCTTAAAAAACTGGGGGTTGGAAATTAATGAAAATAATTCCCTGTCAAAAAAATTTGGTTATTTTG
CAGGTGATGATTCTACTAGATTTGAAGAACTGGAAAAAGCACAAAATAGTAAGCTAATCATTTTTGCAAAAGGAGGTTGG
GGTTCAGCAAGAGTATTAGAAAAAGAACCTTCTTGGCAGAATGGTTTAATGCTTGGATTCTCAGATACATGTTCTTTATT
ACTATCTAAATATTCTCAAGGATTTTTAGGTTCTATTCATGGGCCTATGGTTACTGGCCTTTTTAAAGAGCCAGAGTGGA
GTCTTGAGAGATTAAGAAATTTACTTTTTGAGGGATATGTTGAGGACATAAGAGGAATACCTTTAAGAGGTGGGAAAGCT
AAAGGAGAAATTATCGTTTCTAACTTAACTATTGCCACTTTTTTAATTGGTACTCCTCACTTTCCAGATTGCAAAGGGAA
AATAATAATTTTTGAAGATATTAATGAAGATATTTATAAAATAGATCGCATGTTGACTTACCTCAGGATGACTAAAACAC
TTACTGAAATTGCGGGTATTGGGTTCGGAAGTTTTTCTAATGTTTCCTACGACCTTGAATGGAAAGATTTACTAAAAAAC
TGCATTATTGAAAGACTCAAAGAATTTGATTTTCCTATTCTTTTTGACCTCCCAATAGGTCACATATCGGGAAATGCTTG
CATTCCTTTAGGATACGAAGCCACTTTAAATGGTGATGATGGCATTCTTAGTATCTATACATCTTTTTAA

Upstream 100 bases:

>100_bases
AAAGCAATCAATAAAAAATATTGGGAATCACTTCAAAAATCAATCAATTTATGGTGGAGTCCTACTATTAGGAATTATTA
TTGCCACATAAATTCTAAAT

Downstream 100 bases:

>100_bases
CTAGGGGTTCTTCACAAAAAGTTTTGCTATTTTCAAATCTATAGGGGATGTAATTTTTATATTTGAATAAGTTCCTTCAA
TAATCTTCACTTTCCAATTA

Product: putative carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MVSRLQKGDLIDILAPGSFIDEEENFQKGIEILKNWGLEINENNSLSKKFGYFAGDDSTRFEELEKAQNSKLIIFAKGGW
GSARVLEKEPSWQNGLMLGFSDTCSLLLSKYSQGFLGSIHGPMVTGLFKEPEWSLERLRNLLFEGYVEDIRGIPLRGGKA
KGEIIVSNLTIATFLIGTPHFPDCKGKIIIFEDINEDIYKIDRMLTYLRMTKTLTEIAGIGFGSFSNVSYDLEWKDLLKN
CIIERLKEFDFPILFDLPIGHISGNACIPLGYEATLNGDDGILSIYTSF

Sequences:

>Translated_289_residues
MVSRLQKGDLIDILAPGSFIDEEENFQKGIEILKNWGLEINENNSLSKKFGYFAGDDSTRFEELEKAQNSKLIIFAKGGW
GSARVLEKEPSWQNGLMLGFSDTCSLLLSKYSQGFLGSIHGPMVTGLFKEPEWSLERLRNLLFEGYVEDIRGIPLRGGKA
KGEIIVSNLTIATFLIGTPHFPDCKGKIIIFEDINEDIYKIDRMLTYLRMTKTLTEIAGIGFGSFSNVSYDLEWKDLLKN
CIIERLKEFDFPILFDLPIGHISGNACIPLGYEATLNGDDGILSIYTSF
>Mature_289_residues
MVSRLQKGDLIDILAPGSFIDEEENFQKGIEILKNWGLEINENNSLSKKFGYFAGDDSTRFEELEKAQNSKLIIFAKGGW
GSARVLEKEPSWQNGLMLGFSDTCSLLLSKYSQGFLGSIHGPMVTGLFKEPEWSLERLRNLLFEGYVEDIRGIPLRGGKA
KGEIIVSNLTIATFLIGTPHFPDCKGKIIIFEDINEDIYKIDRMLTYLRMTKTLTEIAGIGFGSFSNVSYDLEWKDLLKN
CIIERLKEFDFPILFDLPIGHISGNACIPLGYEATLNGDDGILSIYTSF

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=298, Percent_Identity=24.496644295302, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32449; Mature: 32449

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRLQKGDLIDILAPGSFIDEEENFQKGIEILKNWGLEINENNSLSKKFGYFAGDDSTR
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHCCEEECCCCHH
FEELEKAQNSKLIIFAKGGWGSARVLEKEPSWQNGLMLGFSDTCSLLLSKYSQGFLGSIH
HHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCC
GPMVTGLFKEPEWSLERLRNLLFEGYVEDIRGIPLRGGKAKGEIIVSNLTIATFLIGTPH
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEEEEEEECCCC
FPDCKGKIIIFEDINEDIYKIDRMLTYLRMTKTLTEIAGIGFGSFSNVSYDLEWKDLLKN
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHH
CIIERLKEFDFPILFDLPIGHISGNACIPLGYEATLNGDDGILSIYTSF
HHHHHHHHCCCCEEEECCCCEECCCEEEECCCEEEECCCCCEEEEEECC
>Mature Secondary Structure
MVSRLQKGDLIDILAPGSFIDEEENFQKGIEILKNWGLEINENNSLSKKFGYFAGDDSTR
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHCCEEECCCCHH
FEELEKAQNSKLIIFAKGGWGSARVLEKEPSWQNGLMLGFSDTCSLLLSKYSQGFLGSIH
HHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCC
GPMVTGLFKEPEWSLERLRNLLFEGYVEDIRGIPLRGGKAKGEIIVSNLTIATFLIGTPH
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEEEEEEECCCC
FPDCKGKIIIFEDINEDIYKIDRMLTYLRMTKTLTEIAGIGFGSFSNVSYDLEWKDLLKN
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHH
CIIERLKEFDFPILFDLPIGHISGNACIPLGYEATLNGDDGILSIYTSF
HHHHHHHHCCCCEEEECCCCEECCCEEEECCCEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]