Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
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Accession | NC_008786 |
Length | 5,566,749 |
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The map label for this gene is 121610227
Identifier: 121610227
GI number: 121610227
Start: 3666565
End: 3667008
Strand: Direct
Name: 121610227
Synonym: Veis_3286
Alternate gene names: NA
Gene position: 3666565-3667008 (Clockwise)
Preceding gene: 121610226
Following gene: 121610228
Centisome position: 65.87
GC content: 67.34
Gene sequence:
>444_bases GTGCCGTTCACCGTGTCGACATCCATCCCGACCGCGCCCGGGTCTTGGCGCAGTGCGGCGCTGGCCTGGGCGGCAATGGC GGCGTCATCCATCGCGGCCATCACGCAGGCGGCTGTCGGTCTGCGCCCGATTCGGCATGGGCTGCGCCTTGTTTTCCAAG CCCGGCCCGGTTTTCCCGGCGACGGGGTGCTGGTTTTCCTCTGCTGCGTGCTCCTCTTTGCCGCAGGCTGCAAGGCCCCA GGCCAGTGCGCTCACGGCCAGGATGCTGGCGATGCGGGGTGCTTGGCAGGCGGTGGTTTTCAACTCGTTCATATGGTTAC TCCTTTGCCGGGTTTGCAGTCTGGGTCGCAGCGCACGGCCGCCGGGTCGGACGGCGCTGAAGTGTTTGTAGGACGGCGCC GCCAAGTTCCCCGGCCTGCCCGCAAACCAAGGCCGACATGGTGA
Upstream 100 bases:
>100_bases CATTGGCTGCCCACCGACGTCACGCCGCTGACGGCTTTGGCGCTGGTCTCGGCGCGGCTGCGGGCAACGGGTCGATGGCG CAGGTCCGTCCCATGTCACT
Downstream 100 bases:
>100_bases TGCGCGACAATCGGCCATGAATTTGTCATCGCTGACCCGCTGGCTGCCCTTTCTCGCTTGGCCCCGACCCGACCGCCAAC TGCTCAAAGGGGAGTTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPFTVSTSIPTAPGSWRSAALAWAAMAASSIAAITQAAVGLRPIRHGLRLVFQARPGFPGDGVLVFLCCVLLFAAGCKAP GQCAHGQDAGDAGCLAGGGFQLVHMVTPLPGLQSGSQRTAAGSDGAEVFVGRRRQVPRPARKPRPTW
Sequences:
>Translated_147_residues MPFTVSTSIPTAPGSWRSAALAWAAMAASSIAAITQAAVGLRPIRHGLRLVFQARPGFPGDGVLVFLCCVLLFAAGCKAP GQCAHGQDAGDAGCLAGGGFQLVHMVTPLPGLQSGSQRTAAGSDGAEVFVGRRRQVPRPARKPRPTW >Mature_146_residues PFTVSTSIPTAPGSWRSAALAWAAMAASSIAAITQAAVGLRPIRHGLRLVFQARPGFPGDGVLVFLCCVLLFAAGCKAPG QCAHGQDAGDAGCLAGGGFQLVHMVTPLPGLQSGSQRTAAGSDGAEVFVGRRRQVPRPARKPRPTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15118; Mature: 14986
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTVSTSIPTAPGSWRSAALAWAAMAASSIAAITQAAVGLRPIRHGLRLVFQARPGFPG CCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCC DGVLVFLCCVLLFAAGCKAPGQCAHGQDAGDAGCLAGGGFQLVHMVTPLPGLQSGSQRTA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEHHHHCCCCCCCCCCCCCC AGSDGAEVFVGRRRQVPRPARKPRPTW CCCCCHHEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure PFTVSTSIPTAPGSWRSAALAWAAMAASSIAAITQAAVGLRPIRHGLRLVFQARPGFPG CEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCC DGVLVFLCCVLLFAAGCKAPGQCAHGQDAGDAGCLAGGGFQLVHMVTPLPGLQSGSQRTA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEHHHHCCCCCCCCCCCCCC AGSDGAEVFVGRRRQVPRPARKPRPTW CCCCCHHEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA