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The map label for this gene is yiaO [C]

Identifier: 121610226

GI number: 121610226

Start: 3664925

End: 3666007

Strand: Direct

Name: yiaO [C]

Synonym: Veis_3285

Alternate gene names: 121610226

Gene position: 3664925-3666007 (Clockwise)

Preceding gene: 121610225

Following gene: 121610227

Centisome position: 65.84

GC content: 62.33

Gene sequence:

>1083_bases
ATGCAGCGTCGTTCCATCATCAAACATGCCGGCATCGCCGGCGTGCTGGCCGCAGGCGCAGCGCCTGCCGTCCACGCGCA
GACCGCCATCCGCTGGCGTTTGGCTTCGAGCTTTCCCAAGTCGCTGGACACCGTCTACGGCGGCGCAGAAGTGTTCTCCA
AGGCCGTCAAAGCCATGTCGGGCGGCAAGTTTGAAATCTCCGTGCATGCCGGCGGCGAGTTGATGCCGCCCTTTGGCGTG
GTCGATGGCGTGCAGCAAGGCACCGTGGAACTGGCGCATACCGCGCCGTACTACTTCTATGGCAAGAACCCGGCGTTTGC
ACTGGGATCGGCCGTGCCCTTCGGCTTCAACGCCCGCCAGATGAACGCCTGGATGATGCACGGCAACGGCCGCAAGCTGA
TGAACGAGTTCTACGGCGCCTACAGCATGATCAGCCTTCCCTGCGGCAACACCGGCGCACAGATGGGTGGCTGGTACCGC
AAGGAAATCAAGTCCCCCGCCGACTTCAAGGGCATGAAGATACGCCTCGGTGGCGGCCTGATCGGCGAAGTGATGCAAAA
GCTCGGCGCCGTGCCGCAAAGCATCCCCGGCGGTGAAATCTACCAGGCGCTGGAAAAAGGCACGCTCGACGCCGTTGAAT
GGGTTGGCCCCTACGACGACCAGAAACTGGGCTTCCACAAGGTGGCCCCGTACTACTACTACCCCGGCTGGTGGGAAGGC
GGCCCGGAGGTAGCGCTGTACATCAACCAGAAAGCCTTCGACAGCCTGTCGGCGGACAACAAGGCCATCGTCGAAGCCGC
TGCCGGCATGGCCCATGGCGACATGCTGGCCAAATACGACGCGCTGAACCCCGTGGCCCTCAAACGGCTGCTGGCCGCCC
AAGCCAAGGTGCTGCGGTTCTCGCCGGCCGTGCTCGACGCCTCGTTCAAAGCCTCGATGGAAGTGTTCGCAGAAAACGAC
GCCAAAAGCCCTGAGTGGAAGAAGATCTACGCCGACATGCGCACCTTCTTGCGCGACCAGATCCTGTGGTTCCGTGTCGC
CGAAGGGCATTACGACAACTTCATGGCGGTGCAGAAGATCTAG

Upstream 100 bases:

>100_bases
GACACTGGCCGAAAAAATCGACCGGCTTTGCGCCGGGTCTTGGGCGTGCAAGGCCGGGTGTGGACGAAGGGGCTGGCCAA
GGCATCGGAGAAAAATCCTC

Downstream 100 bases:

>100_bases
TGTCGCGTCACCGATCATCTGTCGGTCTGCGCTGGCCATCGAAGCGCATCGCGGCGTTGCATCGCTTGCCAATACAGATC
GGTATTGGCTGCGCGATGCG

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; TRAP Dicarboxylate Transporter- Dctp Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MQRRSIIKHAGIAGVLAAGAAPAVHAQTAIRWRLASSFPKSLDTVYGGAEVFSKAVKAMSGGKFEISVHAGGELMPPFGV
VDGVQQGTVELAHTAPYYFYGKNPAFALGSAVPFGFNARQMNAWMMHGNGRKLMNEFYGAYSMISLPCGNTGAQMGGWYR
KEIKSPADFKGMKIRLGGGLIGEVMQKLGAVPQSIPGGEIYQALEKGTLDAVEWVGPYDDQKLGFHKVAPYYYYPGWWEG
GPEVALYINQKAFDSLSADNKAIVEAAAGMAHGDMLAKYDALNPVALKRLLAAQAKVLRFSPAVLDASFKASMEVFAEND
AKSPEWKKIYADMRTFLRDQILWFRVAEGHYDNFMAVQKI

Sequences:

>Translated_360_residues
MQRRSIIKHAGIAGVLAAGAAPAVHAQTAIRWRLASSFPKSLDTVYGGAEVFSKAVKAMSGGKFEISVHAGGELMPPFGV
VDGVQQGTVELAHTAPYYFYGKNPAFALGSAVPFGFNARQMNAWMMHGNGRKLMNEFYGAYSMISLPCGNTGAQMGGWYR
KEIKSPADFKGMKIRLGGGLIGEVMQKLGAVPQSIPGGEIYQALEKGTLDAVEWVGPYDDQKLGFHKVAPYYYYPGWWEG
GPEVALYINQKAFDSLSADNKAIVEAAAGMAHGDMLAKYDALNPVALKRLLAAQAKVLRFSPAVLDASFKASMEVFAEND
AKSPEWKKIYADMRTFLRDQILWFRVAEGHYDNFMAVQKI
>Mature_360_residues
MQRRSIIKHAGIAGVLAAGAAPAVHAQTAIRWRLASSFPKSLDTVYGGAEVFSKAVKAMSGGKFEISVHAGGELMPPFGV
VDGVQQGTVELAHTAPYYFYGKNPAFALGSAVPFGFNARQMNAWMMHGNGRKLMNEFYGAYSMISLPCGNTGAQMGGWYR
KEIKSPADFKGMKIRLGGGLIGEVMQKLGAVPQSIPGGEIYQALEKGTLDAVEWVGPYDDQKLGFHKVAPYYYYPGWWEG
GPEVALYINQKAFDSLSADNKAIVEAAAGMAHGDMLAKYDALNPVALKRLLAAQAKVLRFSPAVLDASFKASMEVFAEND
AKSPEWKKIYADMRTFLRDQILWFRVAEGHYDNFMAVQKI

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39257; Mature: 39257

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRSIIKHAGIAGVLAAGAAPAVHAQTAIRWRLASSFPKSLDTVYGGAEVFSKAVKAMS
CCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHC
GGKFEISVHAGGELMPPFGVVDGVQQGTVELAHTAPYYFYGKNPAFALGSAVPFGFNARQ
CCEEEEEEECCCCCCCCHHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCE
MNAWMMHGNGRKLMNEFYGAYSMISLPCGNTGAQMGGWYRKEIKSPADFKGMKIRLGGGL
EEEEEEECCCHHHHHHHHCCCEEEEECCCCCCCHHCCHHHHHCCCCCCCCCEEEEECCCH
IGEVMQKLGAVPQSIPGGEIYQALEKGTLDAVEWVGPYDDQKLGFHKVAPYYYYPGWWEG
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCEECCCEEECCCEECC
GPEVALYINQKAFDSLSADNKAIVEAAAGMAHGDMLAKYDALNPVALKRLLAAQAKVLRF
CCEEEEEECCHHHHHCCCCCHHHHHHHHCCHHCHHHHHHCCCCHHHHHHHHHHHHHHHCC
SPAVLDASFKASMEVFAENDAKSPEWKKIYADMRTFLRDQILWFRVAEGHYDNFMAVQKI
CHHHHCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECC
>Mature Secondary Structure
MQRRSIIKHAGIAGVLAAGAAPAVHAQTAIRWRLASSFPKSLDTVYGGAEVFSKAVKAMS
CCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHC
GGKFEISVHAGGELMPPFGVVDGVQQGTVELAHTAPYYFYGKNPAFALGSAVPFGFNARQ
CCEEEEEEECCCCCCCCHHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCE
MNAWMMHGNGRKLMNEFYGAYSMISLPCGNTGAQMGGWYRKEIKSPADFKGMKIRLGGGL
EEEEEEECCCHHHHHHHHCCCEEEEECCCCCCCHHCCHHHHHCCCCCCCCCEEEEECCCH
IGEVMQKLGAVPQSIPGGEIYQALEKGTLDAVEWVGPYDDQKLGFHKVAPYYYYPGWWEG
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCEECCCEEECCCEECC
GPEVALYINQKAFDSLSADNKAIVEAAAGMAHGDMLAKYDALNPVALKRLLAAQAKVLRF
CCEEEEEECCHHHHHCCCCCHHHHHHHHCCHHCHHHHHHCCCCHHHHHHHHHHHHHHHCC
SPAVLDASFKASMEVFAENDAKSPEWKKIYADMRTFLRDQILWFRVAEGHYDNFMAVQKI
CHHHHCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA