| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610197
Identifier: 121610197
GI number: 121610197
Start: 3632357
End: 3633649
Strand: Direct
Name: 121610197
Synonym: Veis_3256
Alternate gene names: NA
Gene position: 3632357-3633649 (Clockwise)
Preceding gene: 121610196
Following gene: 121610203
Centisome position: 65.25
GC content: 62.18
Gene sequence:
>1293_bases ATGAAGGCAACCCTACTGACCATGGCAGTTTCAGCCAGCGCGCTGTTGGCCGCCTGCGGAGGCGGCACGCAGGCGCCACC GGGTTCACCGCCCGTCGCAGAAAAGCCATCGGACACAGCACTGGCCGCAGAGGTGCCGCTGAGCACTCCGCCCGCTTCCG TGAAGCACATCCAACTCGAAGAGGTCAAGCCGGCGGAGGTGGTGATACTGTCGCTCCAAGACCTCGACCTTCCTGCCGAC GCCGACAGCGTCACCCCGTCGGGGGCCATATCGAATGCCTTGCTGATGGATGGGACGCTGCGCTTTTCCACCCCGGGCGA CACGGGCGAAGACCAGGAGGCGACGCTGGAGATCAAGAGCGGCGCTGCAACGACCATAAGCCATGTGCTGATCAGATCAC AGCGGCTGACTGCCGCACAGGCCTACGACGACGGGCCAGGGGAGGAAGGCTTGCCGGTTCCTGTCCGCCCGCGCCTGACC GTTGACGGCTTGGGGCCGAACAACACCATCACGGACGCCCCATTGACATTCAGGTTGCAAGGCGTAGGCGCGCTTGACCT GAAAGACGATAGCAAAGGGCTGATCATCGGCGCGAACAATGTCAGGGTTCGCCTGAAGGATTTCTGGTCCTTCAATCCAG TCGATTCCAGCTTTTCGATCTCCGGCCCGGCCATGCAGCGATTGCTCAGCGCGCTGCCGAATGGCGCTCTGACCATAGGG CTGAACTTCGTTTCCAAGGACGGCGAGTTTACAGCTTCTTATGACATGCTGGCGATCAGGCGGGGCGCGAAGGTGTCGGG CAGATTGCAGTCGCTCAACGGCGATCCGGTCACCACATTCGCCGGCCGCAAAATCTTGCTCAAGGGTTACGACGCACAGA TGAGGGCCGAGACCGTGGTCGATGCCAATGGCACCTTCATCTTTGACAATGTGATTTCCGATACCTATTTTCTGACCTGG AACGACCTGCGCAATCCGTATATCGTCGGTGGCAGTATGGCGATTTACCAGGACACCACACAAGCCAGCGTCACGCTGGT GGTGCCGCCGAACATGTTGGCGGCCGGCACCAGCAGCGCCGGACTGGCCGCGCAGCGGGCGGGAGCCGGCACTCCATTGT CATACGTGTCGGGCTACGCGACACAAGACGGCACACCGCCGCCGCCACGCGATATCGGCACTACCGAGATCACGCCGTCG GCCCGCTCTGCGACGCGCGCCGCAGAGGGGGCCAGCGCGACCTCAAACGCGGAATCTGGATCTGAGGCTGAACTTCGTTT CCAAAGACGCTGA
Upstream 100 bases:
>100_bases GGCGATTTGTCCGGCCAACGCAGCCGGCCGGAAAGTGATGGCGACGGTCAAAAATGTGCTTCAGACAGGCCGGCGCACAT CGATCGACGCAGGAGCGGAT
Downstream 100 bases:
>100_bases GTTTGCGGTTGACCATGACATGCGGGTGACCAGGCAGGGTGCGCAGGTGTCGGGCAGATTGCCGTCGCGCAACGGCGATC CGGTCACCACGTTCGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKATLLTMAVSASALLAACGGGTQAPPGSPPVAEKPSDTALAAEVPLSTPPASVKHIQLEEVKPAEVVILSLQDLDLPAD ADSVTPSGAISNALLMDGTLRFSTPGDTGEDQEATLEIKSGAATTISHVLIRSQRLTAAQAYDDGPGEEGLPVPVRPRLT VDGLGPNNTITDAPLTFRLQGVGALDLKDDSKGLIIGANNVRVRLKDFWSFNPVDSSFSISGPAMQRLLSALPNGALTIG LNFVSKDGEFTASYDMLAIRRGAKVSGRLQSLNGDPVTTFAGRKILLKGYDAQMRAETVVDANGTFIFDNVISDTYFLTW NDLRNPYIVGGSMAIYQDTTQASVTLVVPPNMLAAGTSSAGLAAQRAGAGTPLSYVSGYATQDGTPPPPRDIGTTEITPS ARSATRAAEGASATSNAESGSEAELRFQRR
Sequences:
>Translated_430_residues MKATLLTMAVSASALLAACGGGTQAPPGSPPVAEKPSDTALAAEVPLSTPPASVKHIQLEEVKPAEVVILSLQDLDLPAD ADSVTPSGAISNALLMDGTLRFSTPGDTGEDQEATLEIKSGAATTISHVLIRSQRLTAAQAYDDGPGEEGLPVPVRPRLT VDGLGPNNTITDAPLTFRLQGVGALDLKDDSKGLIIGANNVRVRLKDFWSFNPVDSSFSISGPAMQRLLSALPNGALTIG LNFVSKDGEFTASYDMLAIRRGAKVSGRLQSLNGDPVTTFAGRKILLKGYDAQMRAETVVDANGTFIFDNVISDTYFLTW NDLRNPYIVGGSMAIYQDTTQASVTLVVPPNMLAAGTSSAGLAAQRAGAGTPLSYVSGYATQDGTPPPPRDIGTTEITPS ARSATRAAEGASATSNAESGSEAELRFQRR >Mature_430_residues MKATLLTMAVSASALLAACGGGTQAPPGSPPVAEKPSDTALAAEVPLSTPPASVKHIQLEEVKPAEVVILSLQDLDLPAD ADSVTPSGAISNALLMDGTLRFSTPGDTGEDQEATLEIKSGAATTISHVLIRSQRLTAAQAYDDGPGEEGLPVPVRPRLT VDGLGPNNTITDAPLTFRLQGVGALDLKDDSKGLIIGANNVRVRLKDFWSFNPVDSSFSISGPAMQRLLSALPNGALTIG LNFVSKDGEFTASYDMLAIRRGAKVSGRLQSLNGDPVTTFAGRKILLKGYDAQMRAETVVDANGTFIFDNVISDTYFLTW NDLRNPYIVGGSMAIYQDTTQASVTLVVPPNMLAAGTSSAGLAAQRAGAGTPLSYVSGYATQDGTPPPPRDIGTTEITPS ARSATRAAEGASATSNAESGSEAELRFQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44731; Mature: 44731
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATLLTMAVSASALLAACGGGTQAPPGSPPVAEKPSDTALAAEVPLSTPPASVKHIQLE CCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEC EVKPAEVVILSLQDLDLPADADSVTPSGAISNALLMDGTLRFSTPGDTGEDQEATLEIKS CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCEEEEEECC GAATTISHVLIRSQRLTAAQAYDDGPGEEGLPVPVRPRLTVDGLGPNNTITDAPLTFRLQ CCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEE GVGALDLKDDSKGLIIGANNVRVRLKDFWSFNPVDSSFSISGPAMQRLLSALPNGALTIG CCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHCCCCEEEEE LNFVSKDGEFTASYDMLAIRRGAKVSGRLQSLNGDPVTTFAGRKILLKGYDAQMRAETVV EEEEECCCCEEECEEEEEEECCCCCCCEEECCCCCEEEEECCCEEEEECCCCCEEEEEEE DANGTFIFDNVISDTYFLTWNDLRNPYIVGGSMAIYQDTTQASVTLVVPPNMLAAGTSSA ECCCCEEEECCCCCEEEEEECCCCCCEEECCEEEEEECCCCCEEEEEECCCCEECCCCCC GLAAQRAGAGTPLSYVSGYATQDGTPPPPRDIGTTEITPSARSATRAAEGASATSNAESG CCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC SEAELRFQRR CCEEEEEECC >Mature Secondary Structure MKATLLTMAVSASALLAACGGGTQAPPGSPPVAEKPSDTALAAEVPLSTPPASVKHIQLE CCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEC EVKPAEVVILSLQDLDLPADADSVTPSGAISNALLMDGTLRFSTPGDTGEDQEATLEIKS CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCEEEEEECC GAATTISHVLIRSQRLTAAQAYDDGPGEEGLPVPVRPRLTVDGLGPNNTITDAPLTFRLQ CCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEE GVGALDLKDDSKGLIIGANNVRVRLKDFWSFNPVDSSFSISGPAMQRLLSALPNGALTIG CCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHCCCCEEEEE LNFVSKDGEFTASYDMLAIRRGAKVSGRLQSLNGDPVTTFAGRKILLKGYDAQMRAETVV EEEEECCCCEEECEEEEEEECCCCCCCEEECCCCCEEEEECCCEEEEECCCCCEEEEEEE DANGTFIFDNVISDTYFLTWNDLRNPYIVGGSMAIYQDTTQASVTLVVPPNMLAAGTSSA ECCCCEEEECCCCCEEEEEECCCCCCEEECCEEEEEECCCCCEEEEEECCCCEECCCCCC GLAAQRAGAGTPLSYVSGYATQDGTPPPPRDIGTTEITPSARSATRAAEGASATSNAESG CCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC SEAELRFQRR CCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA