Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
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Accession | NC_008786 |
Length | 5,566,749 |
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The map label for this gene is 121610196
Identifier: 121610196
GI number: 121610196
Start: 3629360
End: 3632074
Strand: Direct
Name: 121610196
Synonym: Veis_3255
Alternate gene names: NA
Gene position: 3629360-3632074 (Clockwise)
Preceding gene: 121610173
Following gene: 121610197
Centisome position: 65.2
GC content: 59.82
Gene sequence:
>2715_bases ATGAAGACAACCCTACGGACCATGGCAGTTGCAGTTTTGGCCAGCGCGCTGTTGGCCGCCTGCGGAGGCGGCACGCAGGC GCCACCGGGTTCAGCGCCCGTCGCAGAGGCACCATCGAGCACGCCGCCCATCGCAGAGGCGCCACCGAGCGCACCGGCTG CTTCCGTGAAGCGCTTCCAACTCGAAGAGGTCAAGCCGGCGGAGGTGGTGATACTGTCGCTCCAAGACCTCGGCCTTCCT GCCGACGCCGACAGCGTCACCCCGTCGGGGGCCATATCGAATGCCTTGCTGATGGATGGGACGCTGCGCTTTTCCACCCC GGGCGACACGGGCGAAGACCAGGAGGCGACGCTGGAGATCAAGAGCGGCGCTGCAACGACCATAAGCCATGTGCTGATCA GATCACAGCGGCTGACTGCCGCACAGGCCTACGACGACGGGCCAGAGGAAGATGGCTTGCCGATTCCTGAGTCCCCGCCT CTGACCGTTGACGGCTTGGGGCCGAACAACACCATCACGGGCGCCCCATTGACATTCAGGTTGCAAGGCATAGGCGCGCT TGACCTGAAAGACAAAAGCAAAGGGCTGGTCATGGACAAGAACAATAACGTGCTTGGTCGTCTGGAGGATTTTTGGTCTT TCAATCCGACCGATTCCAGCTTTTCAATCTCCGTTTCGGCCATGCAACGCTTGCTCCACACGTTGCCGAGTGGCGATCTG AATCTGGGGCTGAACTTCGTTTCCAAAGACGCTGAGTTTGCGGTTAACTATGACATGCTGGTGATCAAGCAAGGCGCGAA GGTGTCGGGCAGATTGCAGTCGCTCAACGGCGATTCGGTCACCATGTTCGCGGGCCGCAAGATCTTGCTCAAAGGTTACA ACGAACAGATGAGGGCCGAGGCCGTGGTCGATGCCAATGGCACCTTCACCTTCGAGAATGTGATTCCCGATACCTATTTT CTGACCTGGAACGACCTGCGCAATCCGTATATCGTCAGTGGCAGTATGGCGATTTTCAAAAACACCACACAAGCCAGCGT CACGCTGGTGGTGCCGCCGAACATGTTGGAGGCCAACACCAGCAGCGCCAAGCTGGCCGCGCAGCGGGCGGGAGCCGGCA CCCCATTGTCATACGTGTCGGGCTACGTGACACAAGACGGCACACCGCCGCCGCCACGCGATATCGGCACTACCGAGATC ACGCCGTCGGCCCGCTCTGCGACGCGCGCCGCAGATGGGGCCAGCGCGACCTTCAGCGCCACCTCAAACGGGCTAGGCCA AGACGTTATTACAAATATCAACTTTACGGTGCCGGTCGGCACCAAGAGCGTCGGCGTCAAAATGACCGTGTTTACCTATG AGTATCCACAGTACACGAGACAGCAGAGCATCTACAACGATACTTGGGCGTACTCGGTCGTAGGGTTGCCAGCCACAGGT CTTTCGGCCAATGGTTTAGTGAACCATTCGCATTACACCCAGGGCCGCACGAGTAAGACCGTGTGCGTGGACGTGACCGA GCAGACCAGGAACGCCGCGCTCACCGTCAGCGGTTTTGTGCGTGCCATCAATATCGGCGACTATCTCCTGCCAACCACCA CGACGGTCGAGTTGACCCTGGCATGCAAGGGGCTCAGCGTTTCGTCGGCCCGTTTCTTGTCGCCGAATGCCAATGCCCAT CCGGTACTCAACCCCATCAGGACTGGCGCCAACCTGCCTGGGCCTTACCTGTCGATTCAGCAAAGTGACGCCTTGCCTTT TGGGCCTTACCGGTTGATTCAGCGAAGCGGTAGCGGCGCCAGCCACACCATACCGCTCGAAATCACCTATAAGCCAGCCG ATGCGAAGATCACCGAAGTGCATATTGGTATCTCTCCGGATGGCGGTGATCCGGCTTTTGCTGCCGACAATTTGTTGGGG CAAGCGCATACCACCGACACCCCAGGCAAGATCAAGTTCCCCAGGCTTTCCCTGCCCACCTTCGCTGGCAGCATGCTCAA TGGAAAGCTGGCCGTCACGGTCCGTATCGCAGGCACGGTCGGTGATACGCCCGCAATAAGCTCCGATCCCGCCGAGGGCG GGAAGGTCGAATTCGACGGCGCGACGGCATTTACGCCGCTCTATCTTGCAGCAGATGTTGCCAGTTTGTCGGGGCGACGC TATGGCTCGCGCGATGCCGGCGGTGACTCATGGGCCACTCAACGAACCATCAACTGGCTTAGCAACAAACCTTACCGTTT CGACGACATCAGCGGCAAGCATGTCACCCAGACTGCGAATGGGCGCTCCATTCTCGGCCATGAGGGCCACAGTGATGGCC AGCAGATCGACATGCGCTATGCCGACGGCCGGGGCGGCTTTGGCGACGCGCTGGGCGGGCAGGGTAATGGCGCGCAAATC AAAAAACTGATCGACGATGCTGCGGCCGAGGTGGCAGGCAATGCGGCGCAAAAACCCTCACTGTCCGCATTGCAGGCGTG GATTGCCGCGAACCGCGCACTGCTCGACCGTGAGGCGGCACACGCTTCCACCCGCGTCATCTATATCGGAGACTCGTTCA TCGAGCATGTGCTGATTGACGCGAAATTTCCGCCCGGTGCATCGGCCGCGTCAACTACGATTCCTGGCGTGACGGCATGG ACCAAACCAGCAAAGGTTCGCACCGAAGCTGGCCACCTGAGCCACTGGCATATAAGCATCTCAGCGCGCCCATAA
Upstream 100 bases:
>100_bases GTTCGCTGCCTTGCCAGCGGATTGCAGTTGCCACAGATTGTAGTTACCATTGGTTTCGTTTCAGACACGTCGTTGCATAT AGATCGACACAGGAGCGAAC
Downstream 100 bases:
>100_bases GGGTTTGGTGATTGTCTTGGCGTGGCGGGAGCAGAAAATCACAAGGCCGGCGCCTGAACGCATCGCATGACACACAAGCC ATTGCGCGACATGCTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 904; Mature: 904
Protein sequence:
>904_residues MKTTLRTMAVAVLASALLAACGGGTQAPPGSAPVAEAPSSTPPIAEAPPSAPAASVKRFQLEEVKPAEVVILSLQDLGLP ADADSVTPSGAISNALLMDGTLRFSTPGDTGEDQEATLEIKSGAATTISHVLIRSQRLTAAQAYDDGPEEDGLPIPESPP LTVDGLGPNNTITGAPLTFRLQGIGALDLKDKSKGLVMDKNNNVLGRLEDFWSFNPTDSSFSISVSAMQRLLHTLPSGDL NLGLNFVSKDAEFAVNYDMLVIKQGAKVSGRLQSLNGDSVTMFAGRKILLKGYNEQMRAEAVVDANGTFTFENVIPDTYF LTWNDLRNPYIVSGSMAIFKNTTQASVTLVVPPNMLEANTSSAKLAAQRAGAGTPLSYVSGYVTQDGTPPPPRDIGTTEI TPSARSATRAADGASATFSATSNGLGQDVITNINFTVPVGTKSVGVKMTVFTYEYPQYTRQQSIYNDTWAYSVVGLPATG LSANGLVNHSHYTQGRTSKTVCVDVTEQTRNAALTVSGFVRAINIGDYLLPTTTTVELTLACKGLSVSSARFLSPNANAH PVLNPIRTGANLPGPYLSIQQSDALPFGPYRLIQRSGSGASHTIPLEITYKPADAKITEVHIGISPDGGDPAFAADNLLG QAHTTDTPGKIKFPRLSLPTFAGSMLNGKLAVTVRIAGTVGDTPAISSDPAEGGKVEFDGATAFTPLYLAADVASLSGRR YGSRDAGGDSWATQRTINWLSNKPYRFDDISGKHVTQTANGRSILGHEGHSDGQQIDMRYADGRGGFGDALGGQGNGAQI KKLIDDAAAEVAGNAAQKPSLSALQAWIAANRALLDREAAHASTRVIYIGDSFIEHVLIDAKFPPGASAASTTIPGVTAW TKPAKVRTEAGHLSHWHISISARP
Sequences:
>Translated_904_residues MKTTLRTMAVAVLASALLAACGGGTQAPPGSAPVAEAPSSTPPIAEAPPSAPAASVKRFQLEEVKPAEVVILSLQDLGLP ADADSVTPSGAISNALLMDGTLRFSTPGDTGEDQEATLEIKSGAATTISHVLIRSQRLTAAQAYDDGPEEDGLPIPESPP LTVDGLGPNNTITGAPLTFRLQGIGALDLKDKSKGLVMDKNNNVLGRLEDFWSFNPTDSSFSISVSAMQRLLHTLPSGDL NLGLNFVSKDAEFAVNYDMLVIKQGAKVSGRLQSLNGDSVTMFAGRKILLKGYNEQMRAEAVVDANGTFTFENVIPDTYF LTWNDLRNPYIVSGSMAIFKNTTQASVTLVVPPNMLEANTSSAKLAAQRAGAGTPLSYVSGYVTQDGTPPPPRDIGTTEI TPSARSATRAADGASATFSATSNGLGQDVITNINFTVPVGTKSVGVKMTVFTYEYPQYTRQQSIYNDTWAYSVVGLPATG LSANGLVNHSHYTQGRTSKTVCVDVTEQTRNAALTVSGFVRAINIGDYLLPTTTTVELTLACKGLSVSSARFLSPNANAH PVLNPIRTGANLPGPYLSIQQSDALPFGPYRLIQRSGSGASHTIPLEITYKPADAKITEVHIGISPDGGDPAFAADNLLG QAHTTDTPGKIKFPRLSLPTFAGSMLNGKLAVTVRIAGTVGDTPAISSDPAEGGKVEFDGATAFTPLYLAADVASLSGRR YGSRDAGGDSWATQRTINWLSNKPYRFDDISGKHVTQTANGRSILGHEGHSDGQQIDMRYADGRGGFGDALGGQGNGAQI KKLIDDAAAEVAGNAAQKPSLSALQAWIAANRALLDREAAHASTRVIYIGDSFIEHVLIDAKFPPGASAASTTIPGVTAW TKPAKVRTEAGHLSHWHISISARP >Mature_904_residues MKTTLRTMAVAVLASALLAACGGGTQAPPGSAPVAEAPSSTPPIAEAPPSAPAASVKRFQLEEVKPAEVVILSLQDLGLP ADADSVTPSGAISNALLMDGTLRFSTPGDTGEDQEATLEIKSGAATTISHVLIRSQRLTAAQAYDDGPEEDGLPIPESPP LTVDGLGPNNTITGAPLTFRLQGIGALDLKDKSKGLVMDKNNNVLGRLEDFWSFNPTDSSFSISVSAMQRLLHTLPSGDL NLGLNFVSKDAEFAVNYDMLVIKQGAKVSGRLQSLNGDSVTMFAGRKILLKGYNEQMRAEAVVDANGTFTFENVIPDTYF LTWNDLRNPYIVSGSMAIFKNTTQASVTLVVPPNMLEANTSSAKLAAQRAGAGTPLSYVSGYVTQDGTPPPPRDIGTTEI TPSARSATRAADGASATFSATSNGLGQDVITNINFTVPVGTKSVGVKMTVFTYEYPQYTRQQSIYNDTWAYSVVGLPATG LSANGLVNHSHYTQGRTSKTVCVDVTEQTRNAALTVSGFVRAINIGDYLLPTTTTVELTLACKGLSVSSARFLSPNANAH PVLNPIRTGANLPGPYLSIQQSDALPFGPYRLIQRSGSGASHTIPLEITYKPADAKITEVHIGISPDGGDPAFAADNLLG QAHTTDTPGKIKFPRLSLPTFAGSMLNGKLAVTVRIAGTVGDTPAISSDPAEGGKVEFDGATAFTPLYLAADVASLSGRR YGSRDAGGDSWATQRTINWLSNKPYRFDDISGKHVTQTANGRSILGHEGHSDGQQIDMRYADGRGGFGDALGGQGNGAQI KKLIDDAAAEVAGNAAQKPSLSALQAWIAANRALLDREAAHASTRVIYIGDSFIEHVLIDAKFPPGASAASTTIPGVTAW TKPAKVRTEAGHLSHWHISISARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94842; Mature: 94842
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTLRTMAVAVLASALLAACGGGTQAPPGSAPVAEAPSSTPPIAEAPPSAPAASVKRFQ CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEE LEEVKPAEVVILSLQDLGLPADADSVTPSGAISNALLMDGTLRFSTPGDTGEDQEATLEI CCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCEEEEE KSGAATTISHVLIRSQRLTAAQAYDDGPEEDGLPIPESPPLTVDGLGPNNTITGAPLTFR CCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEE LQGIGALDLKDKSKGLVMDKNNNVLGRLEDFWSFNPTDSSFSISVSAMQRLLHTLPSGDL EECCEEEECCCCCCCEEEECCCCCEEEHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCE NLGLNFVSKDAEFAVNYDMLVIKQGAKVSGRLQSLNGDSVTMFAGRKILLKGYNEQMRAE EECEEEECCCCCEEEECEEEEEECCCCCCCEEEECCCCEEEEEECCEEEEECCCCHHCEE AVVDANGTFTFENVIPDTYFLTWNDLRNPYIVSGSMAIFKNTTQASVTLVVPPNMLEANT EEEECCCCEEECCCCCCEEEEEHHCCCCCEEEECCEEEEECCCCCEEEEEECCCCCCCCC SSAKLAAQRAGAGTPLSYVSGYVTQDGTPPPPRDIGTTEITPSARSATRAADGASATFSA CHHHHHHHHCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEC TSNGLGQDVITNINFTVPVGTKSVGVKMTVFTYEYPQYTRQQSIYNDTWAYSVVGLPATG CCCCCCCHHHCCEEEEEECCCCCCCEEEEEEEEECCCHHHHHHCCCCCEEEEEEECCCCC LSANGLVNHSHYTQGRTSKTVCVDVTEQTRNAALTVSGFVRAINIGDYLLPTTTTVELTL CCCCCEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEHEEEEEECCCEECCCCCEEEEEE ACKGLSVSSARFLSPNANAHPVLNPIRTGANLPGPYLSIQQSDALPFGPYRLIQRSGSGA EEECCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCC SHTIPLEITYKPADAKITEVHIGISPDGGDPAFAADNLLGQAHTTDTPGKIKFPRLSLPT CEEEEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCH FAGSMLNGKLAVTVRIAGTVGDTPAISSDPAEGGKVEFDGATAFTPLYLAADVASLSGRR HHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCC YGSRDAGGDSWATQRTINWLSNKPYRFDDISGKHVTQTANGRSILGHEGHSDGQQIDMRY CCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCEEECCCCCCCCCEEEEEE ADGRGGFGDALGGQGNGAQIKKLIDDAAAEVAGNAAQKPSLSALQAWIAANRALLDREAA ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH HASTRVIYIGDSFIEHVLIDAKFPPGASAASTTIPGVTAWTKPAKVRTEAGHLSHWHISI CCCEEEEEECHHHHHHEEEECCCCCCCCCCCCCCCCCEECCCCCEEEECCCCEEEEEEEE SARP EECC >Mature Secondary Structure MKTTLRTMAVAVLASALLAACGGGTQAPPGSAPVAEAPSSTPPIAEAPPSAPAASVKRFQ CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEE LEEVKPAEVVILSLQDLGLPADADSVTPSGAISNALLMDGTLRFSTPGDTGEDQEATLEI CCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCEEEEE KSGAATTISHVLIRSQRLTAAQAYDDGPEEDGLPIPESPPLTVDGLGPNNTITGAPLTFR CCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEE LQGIGALDLKDKSKGLVMDKNNNVLGRLEDFWSFNPTDSSFSISVSAMQRLLHTLPSGDL EECCEEEECCCCCCCEEEECCCCCEEEHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCE NLGLNFVSKDAEFAVNYDMLVIKQGAKVSGRLQSLNGDSVTMFAGRKILLKGYNEQMRAE EECEEEECCCCCEEEECEEEEEECCCCCCCEEEECCCCEEEEEECCEEEEECCCCHHCEE AVVDANGTFTFENVIPDTYFLTWNDLRNPYIVSGSMAIFKNTTQASVTLVVPPNMLEANT EEEECCCCEEECCCCCCEEEEEHHCCCCCEEEECCEEEEECCCCCEEEEEECCCCCCCCC SSAKLAAQRAGAGTPLSYVSGYVTQDGTPPPPRDIGTTEITPSARSATRAADGASATFSA CHHHHHHHHCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEC TSNGLGQDVITNINFTVPVGTKSVGVKMTVFTYEYPQYTRQQSIYNDTWAYSVVGLPATG CCCCCCCHHHCCEEEEEECCCCCCCEEEEEEEEECCCHHHHHHCCCCCEEEEEEECCCCC LSANGLVNHSHYTQGRTSKTVCVDVTEQTRNAALTVSGFVRAINIGDYLLPTTTTVELTL CCCCCEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEHEEEEEECCCEECCCCCEEEEEE ACKGLSVSSARFLSPNANAHPVLNPIRTGANLPGPYLSIQQSDALPFGPYRLIQRSGSGA EEECCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCC SHTIPLEITYKPADAKITEVHIGISPDGGDPAFAADNLLGQAHTTDTPGKIKFPRLSLPT CEEEEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCH FAGSMLNGKLAVTVRIAGTVGDTPAISSDPAEGGKVEFDGATAFTPLYLAADVASLSGRR HHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCC YGSRDAGGDSWATQRTINWLSNKPYRFDDISGKHVTQTANGRSILGHEGHSDGQQIDMRY CCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCEEECCCCCCCCCEEEEEE ADGRGGFGDALGGQGNGAQIKKLIDDAAAEVAGNAAQKPSLSALQAWIAANRALLDREAA ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH HASTRVIYIGDSFIEHVLIDAKFPPGASAASTTIPGVTAWTKPAKVRTEAGHLSHWHISI CCCEEEEEECHHHHHHEEEECCCCCCCCCCCCCCCCCEECCCCCEEEECCCCEEEEEEEE SARP EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA