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The map label for this gene is dppD [H]

Identifier: 121610142

GI number: 121610142

Start: 3569893

End: 3570768

Strand: Direct

Name: dppD [H]

Synonym: Veis_3201

Alternate gene names: 121610142

Gene position: 3569893-3570768 (Clockwise)

Preceding gene: 121610141

Following gene: 121610143

Centisome position: 64.13

GC content: 71.23

Gene sequence:

>876_bases
ATGAACACCGCAACCACGGCCACGGCAAGCCAGGCGGGCGAATCACCGCTGCTGGAGATCGACAACCTGCGCATCGCGTT
CGCCACGCCGCAGGGCCGGACGCAGGCAGTGCGCGGCGTGCGCCTGCGAATGGGACGGGAACGCCTGGCGGTGGTCGGAG
AATCCGGCTCGGGCAAGTCCATCACCTTCCTGGCGCTGCTCGGCCTGCTGCCGGACAGCGCAACCGTCAGCGCCGACCGC
ATGCGGTTCGACGGGCAGGATCTGCTGGGCCTGGGCGCGCACGCCCAGCGCGCGTTGCGCGGACGCCGCATCGGCATCGT
GGTGCAAGACCCGCGCCAGGGCTTCGACCCGCAGATGAGCATCGGTCAGCAACTCGCCGAGATGCTGCGGCTGCACGGCA
AGGCGCCGCGCCAGGGCGTGCATCGGCGGGTGCGCGAACTGCTGGCCGACATGCATATCCGCGAGCCGGGCCGGGTCGCC
GACCTCTACCCGCACCAAGTCTCCGGCGGCATGGCCCAGCGCGCGATGCTGGCGATGATGCTGTCGGCCGAGCCCGACCT
GCTGATCGCCGACGAGGCCACCTCGGCGCTCGACGCCGTGGCGCGCCATCACATGCTCGCGCTGATCGACGAACAGGTGC
GCCTGCGCGGCATGGGCCTGATCCTCATCAGCCACGACCTCGACCTGGTCGCCGGCCATGCCGACCGCGTGATCGTGATG
TACGCAGGCCGCGTGCTGGAAGAACTCCCGGCCGCCGGCATGGCGCTGGCCGCCACGCACCCGTACACGCGCGGCCTCAT
GGCCTGCCGGCCTGCGCTGCAGCGCCTCGGCGCAGCACTCCCCGTGCTCGACAGGGACCCTGCATGGCTGCATTGA

Upstream 100 bases:

>100_bases
GCCGGGTCTGCTGATTCTGGCGCTGGGCCTGGGCTTGAATTTCCTCGGCGACGCGCTGCGCGATGCCGTCGATCCCGGCG
TCAAGTGAGCGCCGCATGGC

Downstream 100 bases:

>100_bases
ATCCGCTGGCGCTGAGCGTGTCCGACCTCGTCGTGCGTCGCGGCAACGCGGTCGTGGTCGCCGGCGTGTCCTTCGGCGTT
GCCCATGGCGGCAGCCTGGG

Product: ABC transporter-like protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNTATTATASQAGESPLLEIDNLRIAFATPQGRTQAVRGVRLRMGRERLAVVGESGSGKSITFLALLGLLPDSATVSADR
MRFDGQDLLGLGAHAQRALRGRRIGIVVQDPRQGFDPQMSIGQQLAEMLRLHGKAPRQGVHRRVRELLADMHIREPGRVA
DLYPHQVSGGMAQRAMLAMMLSAEPDLLIADEATSALDAVARHHMLALIDEQVRLRGMGLILISHDLDLVAGHADRVIVM
YAGRVLEELPAAGMALAATHPYTRGLMACRPALQRLGAALPVLDRDPAWLH

Sequences:

>Translated_291_residues
MNTATTATASQAGESPLLEIDNLRIAFATPQGRTQAVRGVRLRMGRERLAVVGESGSGKSITFLALLGLLPDSATVSADR
MRFDGQDLLGLGAHAQRALRGRRIGIVVQDPRQGFDPQMSIGQQLAEMLRLHGKAPRQGVHRRVRELLADMHIREPGRVA
DLYPHQVSGGMAQRAMLAMMLSAEPDLLIADEATSALDAVARHHMLALIDEQVRLRGMGLILISHDLDLVAGHADRVIVM
YAGRVLEELPAAGMALAATHPYTRGLMACRPALQRLGAALPVLDRDPAWLH
>Mature_291_residues
MNTATTATASQAGESPLLEIDNLRIAFATPQGRTQAVRGVRLRMGRERLAVVGESGSGKSITFLALLGLLPDSATVSADR
MRFDGQDLLGLGAHAQRALRGRRIGIVVQDPRQGFDPQMSIGQQLAEMLRLHGKAPRQGVHRRVRELLADMHIREPGRVA
DLYPHQVSGGMAQRAMLAMMLSAEPDLLIADEATSALDAVARHHMLALIDEQVRLRGMGLILISHDLDLVAGHADRVIVM
YAGRVLEELPAAGMALAATHPYTRGLMACRPALQRLGAALPVLDRDPAWLH

Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system. Expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG0444

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=257, Percent_Identity=28.4046692607004, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI9955968, Length=237, Percent_Identity=28.2700421940928, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI9955966, Length=237, Percent_Identity=28.2700421940928, Blast_Score=65, Evalue=9e-11,
Organism=Homo sapiens, GI45243524, Length=237, Percent_Identity=28.2700421940928, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI48994883, Length=292, Percent_Identity=38.3561643835616, Blast_Score=191, Evalue=4e-50,
Organism=Escherichia coli, GI1789963, Length=270, Percent_Identity=38.1481481481481, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI145693107, Length=264, Percent_Identity=40.530303030303, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787759, Length=258, Percent_Identity=37.2093023255814, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1788506, Length=259, Percent_Identity=39.3822393822394, Blast_Score=164, Evalue=4e-42,
Organism=Escherichia coli, GI1787548, Length=272, Percent_Identity=33.8235294117647, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1787500, Length=275, Percent_Identity=36.7272727272727, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1789962, Length=275, Percent_Identity=33.4545454545455, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789890, Length=257, Percent_Identity=34.6303501945525, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787758, Length=267, Percent_Identity=31.8352059925094, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787547, Length=264, Percent_Identity=31.8181818181818, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787105, Length=238, Percent_Identity=32.3529411764706, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1786398, Length=250, Percent_Identity=30.8, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI48994997, Length=256, Percent_Identity=29.296875, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI87081834, Length=238, Percent_Identity=33.6134453781513, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1789891, Length=202, Percent_Identity=33.6633663366337, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI87081791, Length=235, Percent_Identity=32.7659574468085, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788450, Length=218, Percent_Identity=31.1926605504587, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786703, Length=235, Percent_Identity=31.9148936170213, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788225, Length=255, Percent_Identity=29.0196078431373, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787370, Length=235, Percent_Identity=28.936170212766, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788761, Length=235, Percent_Identity=29.7872340425532, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789032, Length=206, Percent_Identity=33.9805825242718, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787089, Length=225, Percent_Identity=29.3333333333333, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=28.0851063829787, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87081709, Length=228, Percent_Identity=28.0701754385965, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790162, Length=236, Percent_Identity=26.271186440678, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789991, Length=218, Percent_Identity=28.8990825688073, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1786698, Length=236, Percent_Identity=25.8474576271186, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790467, Length=255, Percent_Identity=25.8823529411765, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786563, Length=208, Percent_Identity=29.8076923076923, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI48994943, Length=222, Percent_Identity=29.2792792792793, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789873, Length=215, Percent_Identity=30.2325581395349, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786253, Length=203, Percent_Identity=29.064039408867, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786803, Length=202, Percent_Identity=27.2277227722772, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1786319, Length=218, Percent_Identity=27.9816513761468, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1789672, Length=207, Percent_Identity=28.9855072463768, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1787712, Length=229, Percent_Identity=28.3842794759825, Blast_Score=61, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI193209708, Length=230, Percent_Identity=32.1739130434783, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71992290, Length=206, Percent_Identity=32.0388349514563, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85726357, Length=240, Percent_Identity=29.5833333333333, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 31485; Mature: 31485

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTATTATASQAGESPLLEIDNLRIAFATPQGRTQAVRGVRLRMGRERLAVVGESGSGKS
CCCCCCCCHHHCCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCH
ITFLALLGLLPDSATVSADRMRFDGQDLLGLGAHAQRALRGRRIGIVVQDPRQGFDPQMS
HHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCCHHHHHHHCCCEEEEEEECCCCCCCHHHH
IGQQLAEMLRLHGKAPRQGVHRRVRELLADMHIREPGRVADLYPHQVSGGMAQRAMLAMM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHCCHHHHHHHHHHH
LSAEPDLLIADEATSALDAVARHHMLALIDEQVRLRGMGLILISHDLDLVAGHADRVIVM
HCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEEE
YAGRVLEELPAAGMALAATHPYTRGLMACRPALQRLGAALPVLDRDPAWLH
HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTATTATASQAGESPLLEIDNLRIAFATPQGRTQAVRGVRLRMGRERLAVVGESGSGKS
CCCCCCCCHHHCCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCH
ITFLALLGLLPDSATVSADRMRFDGQDLLGLGAHAQRALRGRRIGIVVQDPRQGFDPQMS
HHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCCHHHHHHHCCCEEEEEEECCCCCCCHHHH
IGQQLAEMLRLHGKAPRQGVHRRVRELLADMHIREPGRVADLYPHQVSGGMAQRAMLAMM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHCCHHHHHHHHHHH
LSAEPDLLIADEATSALDAVARHHMLALIDEQVRLRGMGLILISHDLDLVAGHADRVIVM
HCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEEE
YAGRVLEELPAAGMALAATHPYTRGLMACRPALQRLGAALPVLDRDPAWLH
HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]