| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610069
Identifier: 121610069
GI number: 121610069
Start: 3475491
End: 3475829
Strand: Direct
Name: 121610069
Synonym: Veis_3127
Alternate gene names: NA
Gene position: 3475491-3475829 (Clockwise)
Preceding gene: 121610067
Following gene: 121610070
Centisome position: 62.43
GC content: 66.37
Gene sequence:
>339_bases ATGAAGCGTTGCATTGTCGGCATCCGCCGTCCCGAAGATCGGAGCCGTCCTGCCGCTGGGCATGGGCAGCCGTCCGTCTG GTTTCCCTCGATGCCCACGCTGGCGGCGGTGCTGTCCGAGAACAACCGGGCACTGCTGCGCTTGATCCGCGACCGGCGGC CCAAGTCGCTGACGGCGCTGGCCGAGCTGACTGGGCGGCGCGTGCCCAACCTGTCGCGCTCACTGCGGATGATGGAAGGC TATGGTCTGGTCAAGCTCAAGCGCGACGGGTACGGCGTGGAGCCGGTGGCGTTGGCAACCGAATTTCTGGTAGTGCTGAA CGACCCGGCACGCGAATAG
Upstream 100 bases:
>100_bases CGGCGAGGAAGCCAAGCAGAAACTGATGCTCCAGACGGCCCCTTCCTGTATGCCAGCCTGATAAACTGATAGTCATCCTT CTTTCGCCAGTCCATCGAAG
Downstream 100 bases:
>100_bases GACAAAACACGATGGCACAGAACGACAACAACGGCGGCAACCTGGGCTTCGAAGCGGAACTGTTCAAGACCGCCGACAAA CTGCGCGGCAACATGGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein MarR; Transcriptional Regulator Protein-Like Protein
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKRCIVGIRRPEDRSRPAAGHGQPSVWFPSMPTLAAVLSENNRALLRLIRDRRPKSLTALAELTGRRVPNLSRSLRMMEG YGLVKLKRDGYGVEPVALATEFLVVLNDPARE
Sequences:
>Translated_112_residues MKRCIVGIRRPEDRSRPAAGHGQPSVWFPSMPTLAAVLSENNRALLRLIRDRRPKSLTALAELTGRRVPNLSRSLRMMEG YGLVKLKRDGYGVEPVALATEFLVVLNDPARE >Mature_112_residues MKRCIVGIRRPEDRSRPAAGHGQPSVWFPSMPTLAAVLSENNRALLRLIRDRRPKSLTALAELTGRRVPNLSRSLRMMEG YGLVKLKRDGYGVEPVALATEFLVVLNDPARE
Specific function: Unknown
COG id: COG4190
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12535; Mature: 12535
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRCIVGIRRPEDRSRPAAGHGQPSVWFPSMPTLAAVLSENNRALLRLIRDRRPKSLTAL CCCCEECCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHH AELTGRRVPNLSRSLRMMEGYGLVKLKRDGYGVEPVALATEFLVVLNDPARE HHHHCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHEEECCCCCC >Mature Secondary Structure MKRCIVGIRRPEDRSRPAAGHGQPSVWFPSMPTLAAVLSENNRALLRLIRDRRPKSLTAL CCCCEECCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHH AELTGRRVPNLSRSLRMMEGYGLVKLKRDGYGVEPVALATEFLVVLNDPARE HHHHCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA