| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610056
Identifier: 121610056
GI number: 121610056
Start: 3460175
End: 3460948
Strand: Direct
Name: 121610056
Synonym: Veis_3114
Alternate gene names: NA
Gene position: 3460175-3460948 (Clockwise)
Preceding gene: 121610055
Following gene: 121610061
Centisome position: 62.16
GC content: 63.95
Gene sequence:
>774_bases ATGACGACATCACTGTGCCGCACAACCTCCAATTCCATCATCAAATGGGCATTGCTCGGCGCGGCCAGCTATGCGCTAGC TGCGCTGCTTCACGAAGGTGTCGGACATGGGTTAGGCTGCTTGCTGGCAGGCGGCGACATCGAGCTGGTGACGTCGAGCT ACCTTTCTTGCTCGCGGCGCGGTGCGCTGATCGATGTTGCCGGGCCAGTAGCCAATGCCATCGCCTTCGTCGCTTTCGCC GCCCTGGCATCGTGGGCCAAGTCTTATCGCAGGCCGGTGTCCCGCTTCGCGTCGGGGTTTTGCTGGCTTGAGGCCGCGTG GAACCTCTACTGGTTCACTGGCTACCTCCTTTACTCAGGCCTCACCGATCACGGAGACTGGAGTCTCATCGCGCAGAGCC TACCGATGGGCCCGTACCTCCTCATGGCCGCAGGGCTGCTTGCCACGATCCAGGGTATCCGATGGTTCCGCCGCAGCAAT CCCTTCGGGCAGGCGAATACGCTGTTCGCCGCCTATGCCGGCGGCAGTGCCGCGGCCCTCTTTGCGGCGGCGTTCGACCC CGCAGGGTTCGTCGGCCTGTTACTCAGGGCCCCTCCAGCTGCGCCCCTGGCAGGGATCTGCCTGCTGCTCTCGGTGGACC GACACCATCGGTCGCCGATTGAGGATGGCGTGTCACGCCACGAAGCCGGCTTTCGCGACGTGGTGTGGCTCGGAGGGCTC GTCATCGGCACGCTGTTTTTCATCGGAGTCCTGGGACCTGGCTGGAGACCTTGA
Upstream 100 bases:
>100_bases AGCTGCCAGGGCTGCTGTCGTCGCAGGCCTTGCTCGGTGTCGCGATCGCCTCCCTGGCGCTGCTGGTGTGGATCGCCAAG CGTTCAAGCCGCCTGACACT
Downstream 100 bases:
>100_bases GGTGCGATTTCATGCGGCCCGCAACTCGGTGGCAGACCAGGCCCACGCCACCGAATTGATCATTACCACCGACTGGCCCT GATGCAGCAACCCCTGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTTSLCRTTSNSIIKWALLGAASYALAALLHEGVGHGLGCLLAGGDIELVTSSYLSCSRRGALIDVAGPVANAIAFVAFA ALASWAKSYRRPVSRFASGFCWLEAAWNLYWFTGYLLYSGLTDHGDWSLIAQSLPMGPYLLMAAGLLATIQGIRWFRRSN PFGQANTLFAAYAGGSAAALFAAAFDPAGFVGLLLRAPPAAPLAGICLLLSVDRHHRSPIEDGVSRHEAGFRDVVWLGGL VIGTLFFIGVLGPGWRP
Sequences:
>Translated_257_residues MTTSLCRTTSNSIIKWALLGAASYALAALLHEGVGHGLGCLLAGGDIELVTSSYLSCSRRGALIDVAGPVANAIAFVAFA ALASWAKSYRRPVSRFASGFCWLEAAWNLYWFTGYLLYSGLTDHGDWSLIAQSLPMGPYLLMAAGLLATIQGIRWFRRSN PFGQANTLFAAYAGGSAAALFAAAFDPAGFVGLLLRAPPAAPLAGICLLLSVDRHHRSPIEDGVSRHEAGFRDVVWLGGL VIGTLFFIGVLGPGWRP >Mature_256_residues TTSLCRTTSNSIIKWALLGAASYALAALLHEGVGHGLGCLLAGGDIELVTSSYLSCSRRGALIDVAGPVANAIAFVAFAA LASWAKSYRRPVSRFASGFCWLEAAWNLYWFTGYLLYSGLTDHGDWSLIAQSLPMGPYLLMAAGLLATIQGIRWFRRSNP FGQANTLFAAYAGGSAAALFAAAFDPAGFVGLLLRAPPAAPLAGICLLLSVDRHHRSPIEDGVSRHEAGFRDVVWLGGLV IGTLFFIGVLGPGWRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27219; Mature: 27088
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSLCRTTSNSIIKWALLGAASYALAALLHEGVGHGLGCLLAGGDIELVTSSYLSCSRR CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC GALIDVAGPVANAIAFVAFAALASWAKSYRRPVSRFASGFCWLEAAWNLYWFTGYLLYSG CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC LTDHGDWSLIAQSLPMGPYLLMAAGLLATIQGIRWFRRSNPFGQANTLFAAYAGGSAAAL CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHH FAAAFDPAGFVGLLLRAPPAAPLAGICLLLSVDRHHRSPIEDGVSRHEAGFRDVVWLGGL HHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHH VIGTLFFIGVLGPGWRP HHHHHHHHHHCCCCCCC >Mature Secondary Structure TTSLCRTTSNSIIKWALLGAASYALAALLHEGVGHGLGCLLAGGDIELVTSSYLSCSRR CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC GALIDVAGPVANAIAFVAFAALASWAKSYRRPVSRFASGFCWLEAAWNLYWFTGYLLYSG CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC LTDHGDWSLIAQSLPMGPYLLMAAGLLATIQGIRWFRRSNPFGQANTLFAAYAGGSAAAL CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHH FAAAFDPAGFVGLLLRAPPAAPLAGICLLLSVDRHHRSPIEDGVSRHEAGFRDVVWLGGL HHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHH VIGTLFFIGVLGPGWRP HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA