| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610055
Identifier: 121610055
GI number: 121610055
Start: 3459282
End: 3460178
Strand: Direct
Name: 121610055
Synonym: Veis_3113
Alternate gene names: NA
Gene position: 3459282-3460178 (Clockwise)
Preceding gene: 121610054
Following gene: 121610056
Centisome position: 62.14
GC content: 67.0
Gene sequence:
>897_bases ATGGCACACAGGCTCTCCCTCGTTGCCTGGCGCGCGCTGAAGCCTCATGCAGCCACCGCGGCGCGCTTGCTCGGTGCAGC CTTGATCGCTATGGCCGGCGGGCTGATCCTGCTGCCCGAATCAGCCGTCTTGCGCGCGACTTGGGTCGTGCTCTGTGGCG CCGTGGCGCTATACGGGGCCCACGTGCTGTTCGCGCTGGCAGGCATCCTTTTTGGTTTGCCGCCCGAGCTCCGGCGCAAA CTCCAGCATCTGCTGGCCGGTGGTGCCATCACGGCTATCGGCTGGAGCATCGGCTCGAGCCTGGCCGTCACGATGATGTG CAGCGCGATGGTGGCGTGGCTCGTCTTCAGCAAGAGGCTGAAAGACGCACAGACTCTGAGGCATCTCACGATGAGCCGCC GCGACAGCCGGCAGACCCACGGCGAGATGCTGCTGCCGCTGGGCCTATTGCTGTCGCTGTGGGTCGCGGGTGGCACGACA CCGGCCTGGTTCTTCGGCGCGCTGACCCTCACGCTCGCTGATGCGGCGGCGGCGTTGGTCGGCGTGCACATGGGGCGCAT GCAGTATGGCGTGCACAGGGGGGCCGGGCAGAAGTCGGTCGAAGGCAACCTCGCCTTCTTCGCCGTGACGCTCATCCTCG GCTGGATAATCCTGCCCGATGCCGGCCTGGAAGCGCCCGCCACTGCGGTTCTGGCCTTGATGTCGGGAGCCGTGGTGCTC ACGGTGCTGGAGTCGCTGTGCACCCATGGCCTCGACAATCTCCTGCTGCCGATGGCCGCGGTGCTGCTGGTCCAGCTGCC AGGGCTGCTGTCGTCGCAGGCCTTGCTCGGTGTCGCGATCGCCTCCCTGGCGCTGCTGGTGTGGATCGCCAAGCGTTCAA GCCGCCTGACACTATGA
Upstream 100 bases:
>100_bases AGACGCCTGGTGTGGTGCAAGACGTCGACCAGCCGTCGGACCTGGCCGCTCTCGAAGGGCCCGACGACACCACGCGCAAT TCGTACCCCGAGGAGTCAAC
Downstream 100 bases:
>100_bases CGACATCACTGTGCCGCACAACCTCCAATTCCATCATCAAATGGGCATTGCTCGGCGCGGCCAGCTATGCGCTAGCTGCG CTGCTTCACGAAGGTGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MAHRLSLVAWRALKPHAATAARLLGAALIAMAGGLILLPESAVLRATWVVLCGAVALYGAHVLFALAGILFGLPPELRRK LQHLLAGGAITAIGWSIGSSLAVTMMCSAMVAWLVFSKRLKDAQTLRHLTMSRRDSRQTHGEMLLPLGLLLSLWVAGGTT PAWFFGALTLTLADAAAALVGVHMGRMQYGVHRGAGQKSVEGNLAFFAVTLILGWIILPDAGLEAPATAVLALMSGAVVL TVLESLCTHGLDNLLLPMAAVLLVQLPGLLSSQALLGVAIASLALLVWIAKRSSRLTL
Sequences:
>Translated_298_residues MAHRLSLVAWRALKPHAATAARLLGAALIAMAGGLILLPESAVLRATWVVLCGAVALYGAHVLFALAGILFGLPPELRRK LQHLLAGGAITAIGWSIGSSLAVTMMCSAMVAWLVFSKRLKDAQTLRHLTMSRRDSRQTHGEMLLPLGLLLSLWVAGGTT PAWFFGALTLTLADAAAALVGVHMGRMQYGVHRGAGQKSVEGNLAFFAVTLILGWIILPDAGLEAPATAVLALMSGAVVL TVLESLCTHGLDNLLLPMAAVLLVQLPGLLSSQALLGVAIASLALLVWIAKRSSRLTL >Mature_297_residues AHRLSLVAWRALKPHAATAARLLGAALIAMAGGLILLPESAVLRATWVVLCGAVALYGAHVLFALAGILFGLPPELRRKL QHLLAGGAITAIGWSIGSSLAVTMMCSAMVAWLVFSKRLKDAQTLRHLTMSRRDSRQTHGEMLLPLGLLLSLWVAGGTTP AWFFGALTLTLADAAAALVGVHMGRMQYGVHRGAGQKSVEGNLAFFAVTLILGWIILPDAGLEAPATAVLALMSGAVVLT VLESLCTHGLDNLLLPMAAVLLVQLPGLLSSQALLGVAIASLALLVWIAKRSSRLTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31216; Mature: 31085
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRLSLVAWRALKPHAATAARLLGAALIAMAGGLILLPESAVLRATWVVLCGAVALYGA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHH HVLFALAGILFGLPPELRRKLQHLLAGGAITAIGWSIGSSLAVTMMCSAMVAWLVFSKRL HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDAQTLRHLTMSRRDSRQTHGEMLLPLGLLLSLWVAGGTTPAWFFGALTLTLADAAAALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GVHMGRMQYGVHRGAGQKSVEGNLAFFAVTLILGWIILPDAGLEAPATAVLALMSGAVVL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TVLESLCTHGLDNLLLPMAAVLLVQLPGLLSSQALLGVAIASLALLVWIAKRSSRLTL HHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AHRLSLVAWRALKPHAATAARLLGAALIAMAGGLILLPESAVLRATWVVLCGAVALYGA CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHH HVLFALAGILFGLPPELRRKLQHLLAGGAITAIGWSIGSSLAVTMMCSAMVAWLVFSKRL HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDAQTLRHLTMSRRDSRQTHGEMLLPLGLLLSLWVAGGTTPAWFFGALTLTLADAAAALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GVHMGRMQYGVHRGAGQKSVEGNLAFFAVTLILGWIILPDAGLEAPATAVLALMSGAVVL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TVLESLCTHGLDNLLLPMAAVLLVQLPGLLSSQALLGVAIASLALLVWIAKRSSRLTL HHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA