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The map label for this gene is ycgE [C]

Identifier: 121610040

GI number: 121610040

Start: 3447080

End: 3447502

Strand: Direct

Name: ycgE [C]

Synonym: Veis_3096

Alternate gene names: 121610040

Gene position: 3447080-3447502 (Clockwise)

Preceding gene: 121610039

Following gene: 121610042

Centisome position: 61.92

GC content: 62.17

Gene sequence:

>423_bases
ATGGGCCACCACCTTCCCGCCATCCCTGCCAAGCGCTACTTCACCATTGGTGAGGTCGCCCAACTGTGCGGCGTCAAACC
CCATGTGCTGCGTTACTGGGAGCAGGAGTTCTCCCAACTGCGCCCGATGAAGCGGCGTGGCAACCGGCGCTACTATCAGC
ACCACGAGGTGCTGATGATTCGCCGCATTCGCGACCTGCTCTACGAGCAGGGCTTTACCATCAGCGGTGCCCGCAACCGC
CTCCAGGAACTCACCTCCTCGGAGTCTGGTGCGTTGGCGGCAAACGCCACGGCCGAGTCCGGATTCGGCATGCTGCTCGA
CAGCGCGCCAGACCTTGGCATCGATGCGCTGGATTTCGCTTTGGACTCGAACGCCGTGCGCAAAGAATTATTCGAGATCC
GCGCGCTGCTGGCGCTGAACTGA

Upstream 100 bases:

>100_bases
AATTGGAGACCGCCTTTGTCGCAATCTGGACACCAACTGGCTGGCGGTACCGGCGTGTCTGCGGTAGGCTTGCCAGCTTT
CTGGTCTGAACCCGCAATCC

Downstream 100 bases:

>100_bases
AGTGTTTCCCGCATATACTCCACCCCTTGTCGGCGTGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCG
CGAGTTCGAATCCCGCCACG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; Transcriptional Regulator Protein; MerR Family Regulatory Protein; Transcriptional Regulator MerR; TRANSCRIPTIONal REGULATOR MerR Family; Transcriptional Regulatory Protein; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein; MerR Protein

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MGHHLPAIPAKRYFTIGEVAQLCGVKPHVLRYWEQEFSQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYEQGFTISGARNR
LQELTSSESGALAANATAESGFGMLLDSAPDLGIDALDFALDSNAVRKELFEIRALLALN

Sequences:

>Translated_140_residues
MGHHLPAIPAKRYFTIGEVAQLCGVKPHVLRYWEQEFSQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYEQGFTISGARNR
LQELTSSESGALAANATAESGFGMLLDSAPDLGIDALDFALDSNAVRKELFEIRALLALN
>Mature_139_residues
GHHLPAIPAKRYFTIGEVAQLCGVKPHVLRYWEQEFSQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYEQGFTISGARNRL
QELTSSESGALAANATAESGFGMLLDSAPDLGIDALDFALDSNAVRKELFEIRALLALN

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15898; Mature: 15767

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHHLPAIPAKRYFTIGEVAQLCGVKPHVLRYWEQEFSQLRPMKRRGNRRYYQHHEVLMI
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHH
RRIRDLLYEQGFTISGARNRLQELTSSESGALAANATAESGFGMLLDSAPDLGIDALDFA
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCEECCCCCCCCHHHHHH
LDSNAVRKELFEIRALLALN
HCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GHHLPAIPAKRYFTIGEVAQLCGVKPHVLRYWEQEFSQLRPMKRRGNRRYYQHHEVLMI
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHH
RRIRDLLYEQGFTISGARNRLQELTSSESGALAANATAESGFGMLLDSAPDLGIDALDFA
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCEECCCCCCCCHHHHHH
LDSNAVRKELFEIRALLALN
HCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA