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The map label for this gene is fnr [C]

Identifier: 121609893

GI number: 121609893

Start: 3296236

End: 3296880

Strand: Direct

Name: fnr [C]

Synonym: Veis_2946

Alternate gene names: 121609893

Gene position: 3296236-3296880 (Clockwise)

Preceding gene: 121609888

Following gene: 121609895

Centisome position: 59.21

GC content: 66.51

Gene sequence:

>645_bases
GTGCCGCATTTCGGCTGGGAGCCGCTGCTGGCTGCGGGCGCACCCGGCGTGCGCTTGCGCAAGGGCCAGACACTGTTTTC
GCAGGGCCAGGCAGTGCAGCATGTCTATGTGGTCGAGCAAGGGCGCGTGCGACTGATGCTGCTGTCGGCGGCCGGGCACG
AAAAGCACCTGGCCATCGTCGGCACGCGCGGCATGGTCGGCGAATGCAGTGCCTTCCTCGACGGACGGCATTCGATGACG
GCCATGGCCTCGTCGGACGTGCTGGTCAGGCAGATCGGTCGCCAGCAGTTGCGCGACGCCATGGAGCGCGACCCGGGCTG
CCTGCGCCAGGTGCTCTGGCTGGCCAACATGAAGCTGCGCATCATCGCCAACCAGAACCTGCTGCTGAGCCAGGCCACGG
CCGCGCAGCGCGTGCTGCACCACCTGGTGCAGTTGGCCGACACCTACGGCCAGGCGGTGGACGGCGGCACGTTGATCGGC
GTCGCGTTCACGCACCAGGAGATGGCCAACATCACCGGCCTGAGCCGGGTCATGGTCTCGAACGTGCTGATAGCGCTGCA
CGAGCAAGGGCTGATCGGTAAAAGCAAGTTGCATTGCGTGATTCGGGACATGCAGGCACTGAGGCGACGCGCAGCCGGTT
CGTGA

Upstream 100 bases:

>100_bases
CGCGCCGGCAAGGCCCTGTGGTGATGGATGGCTGATGCAGCAAAGCGCGAACGACACCCATTGCAGCAACGGCACGGCAA
CCCCCTCCGCGTGGATCGAA

Downstream 100 bases:

>100_bases
AGGGGCCGGTTGGTCGATGGGGCGCGTCTCGGACTGCGTTGCAGTCTAGACAGGCCGTGCAAGGCCGTATGTCAATGGCT
TGACAAGCGCCGCCATTTTT

Product: CRP/FNR family transcriptional regulator

Products: NA

Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Anaerobic Regulatory Protein; Regulator; CRP Family Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein; Transcription Regulator

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPHFGWEPLLAAGAPGVRLRKGQTLFSQGQAVQHVYVVEQGRVRLMLLSAAGHEKHLAIVGTRGMVGECSAFLDGRHSMT
AMASSDVLVRQIGRQQLRDAMERDPGCLRQVLWLANMKLRIIANQNLLLSQATAAQRVLHHLVQLADTYGQAVDGGTLIG
VAFTHQEMANITGLSRVMVSNVLIALHEQGLIGKSKLHCVIRDMQALRRRAAGS

Sequences:

>Translated_214_residues
MPHFGWEPLLAAGAPGVRLRKGQTLFSQGQAVQHVYVVEQGRVRLMLLSAAGHEKHLAIVGTRGMVGECSAFLDGRHSMT
AMASSDVLVRQIGRQQLRDAMERDPGCLRQVLWLANMKLRIIANQNLLLSQATAAQRVLHHLVQLADTYGQAVDGGTLIG
VAFTHQEMANITGLSRVMVSNVLIALHEQGLIGKSKLHCVIRDMQALRRRAAGS
>Mature_213_residues
PHFGWEPLLAAGAPGVRLRKGQTLFSQGQAVQHVYVVEQGRVRLMLLSAAGHEKHLAIVGTRGMVGECSAFLDGRHSMTA
MASSDVLVRQIGRQQLRDAMERDPGCLRQVLWLANMKLRIIANQNLLLSQATAAQRVLHHLVQLADTYGQAVDGGTLIGV
AFTHQEMANITGLSRVMVSNVLIALHEQGLIGKSKLHCVIRDMQALRRRAAGS

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23339; Mature: 23208

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHFGWEPLLAAGAPGVRLRKGQTLFSQGQAVQHVYVVEQGRVRLMLLSAAGHEKHLAIV
CCCCCCCHHHHCCCCCCEEECCCHHHHCCCHHEEEEEEECCCEEEEEEECCCCCCEEEEE
GTRGMVGECSAFLDGRHSMTAMASSDVLVRQIGRQQLRDAMERDPGCLRQVLWLANMKLR
ECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEE
IIANQNLLLSQATAAQRVLHHLVQLADTYGQAVDGGTLIGVAFTHQEMANITGLSRVMVS
EEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHH
NVLIALHEQGLIGKSKLHCVIRDMQALRRRAAGS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PHFGWEPLLAAGAPGVRLRKGQTLFSQGQAVQHVYVVEQGRVRLMLLSAAGHEKHLAIV
CCCCCCHHHHCCCCCCEEECCCHHHHCCCHHEEEEEEECCCEEEEEEECCCCCCEEEEE
GTRGMVGECSAFLDGRHSMTAMASSDVLVRQIGRQQLRDAMERDPGCLRQVLWLANMKLR
ECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEE
IIANQNLLLSQATAAQRVLHHLVQLADTYGQAVDGGTLIGVAFTHQEMANITGLSRVMVS
EEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHH
NVLIALHEQGLIGKSKLHCVIRDMQALRRRAAGS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA