| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609882
Identifier: 121609882
GI number: 121609882
Start: 3286101
End: 3287252
Strand: Direct
Name: 121609882
Synonym: Veis_2935
Alternate gene names: NA
Gene position: 3286101-3287252 (Clockwise)
Preceding gene: 121609881
Following gene: 121609883
Centisome position: 59.03
GC content: 69.18
Gene sequence:
>1152_bases ATGAGCCGGAAGCAACACGCGGTCGCCATTGCCGGCGCCGCCGAAACCGATCTCGGCGCGTTGCCGCAGCTGTCCGAGCT GGACCTGCGCGCCGACGCCGCCCACCGCGCGCTGGCCGATGCCGGCCTGACGCTGGCCGATGTCGACGGCATCACCAGTG CCGTCGATTCGCCGATCGATGTGGCGCACTACCTTGGCATCACGCCCTCGTGGTATGACGGCACCTCGGTCGGCGGCTGC TCGTTCCTGGTCCATGTGCGCCATGCGGCCGCAGCCATCCACGCCGGACTGTGCACGACGGTGCTGGTGCTGCACGGCCA GTCGGGCCGCTCTCATGTCGGCCGGGTGCCCCGGCCTGCGGCGCCCTTCACGATGGCGGGGCAGTTCGAGACGCCCTACG GTGTCGCGACGCCGCCCAACATGTTCACGCTGCCGATGCTGCGCTTCATGAAGGAGACCGGCACGACGCACGAGCAATTG GCCGAGGTGGTGGTGGCGCAAAGCCACTGGGCGCAGGGCAACCCGCGCGCCAGTCGCAACAAACTGCTCACCGTCGGGGA CGTGCTGGCCTCGCCGATGATCGCCTACCCGTTTCACAAGCTCGAATGCTGCGTGGTCACCGATGGCGGCGGCGCGCTGC TCATCACGTCGGCAGAACGCGCGCGCGACCTGCGCCGCTGCGGCACGCCGGTGTACCTGCGCGGGGCGGGCGAGTCCTGC GACAGCCCGCTGGTCTCGATGATGGACGACATGACGCGCGCAAAGGGCTTTCGCCTGTCCAGCCGGGCAGCCTTTGCGCA GGCGGGCATCCGCCATGCCGATGTCGATCACCTGATGATCTACGATGCGTTCGCCCACTTGCCGCTGTACGGGCTGGAGG ACATGGGTTTCGTCGGTCGGGGCGAGGCCGGCGCGTTCATCGCCGAGGGCCACACGCGGCCCGGCGGGCGCCTGCCGCTC AACACCCATGGCGGCGGCCTGCTCTACACGCACACCGGCATGTACGGCATGTTTGCGATCCTGGAGTCGGTGCGCCAGTT GCGCGGCGAGGCCTTCCGCCAGGTCGAGCATGTGCGCACCAGCGTGGTCCAGGGCGTGGGCGGCATGTTCACCGCCGCAG CCACACTGGTGCTGTCCAACCAGAGCGATTGA
Upstream 100 bases:
>100_bases CCGAATGCCTCACGCTCGACATGCCGCTGGAGGTGGTGTTCGAGGGGCGCGGCGATCAGACGCTGCCGATGTTCAAGCCG GCGCCGGCGAGGGTGCCCCG
Downstream 100 bases:
>100_bases GGCGGCGACGCGATGGCGGCCCCGAAATACCTCGGCGACTTCGCCGTCCTGACGCCGGACAAGCCGGCCGTCATCAACGG CACCACTGGCGCGAGCCTGA
Product: acetyl-CoA acetyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSRKQHAVAIAGAAETDLGALPQLSELDLRADAAHRALADAGLTLADVDGITSAVDSPIDVAHYLGITPSWYDGTSVGGC SFLVHVRHAAAAIHAGLCTTVLVLHGQSGRSHVGRVPRPAAPFTMAGQFETPYGVATPPNMFTLPMLRFMKETGTTHEQL AEVVVAQSHWAQGNPRASRNKLLTVGDVLASPMIAYPFHKLECCVVTDGGGALLITSAERARDLRRCGTPVYLRGAGESC DSPLVSMMDDMTRAKGFRLSSRAAFAQAGIRHADVDHLMIYDAFAHLPLYGLEDMGFVGRGEAGAFIAEGHTRPGGRLPL NTHGGGLLYTHTGMYGMFAILESVRQLRGEAFRQVEHVRTSVVQGVGGMFTAAATLVLSNQSD
Sequences:
>Translated_383_residues MSRKQHAVAIAGAAETDLGALPQLSELDLRADAAHRALADAGLTLADVDGITSAVDSPIDVAHYLGITPSWYDGTSVGGC SFLVHVRHAAAAIHAGLCTTVLVLHGQSGRSHVGRVPRPAAPFTMAGQFETPYGVATPPNMFTLPMLRFMKETGTTHEQL AEVVVAQSHWAQGNPRASRNKLLTVGDVLASPMIAYPFHKLECCVVTDGGGALLITSAERARDLRRCGTPVYLRGAGESC DSPLVSMMDDMTRAKGFRLSSRAAFAQAGIRHADVDHLMIYDAFAHLPLYGLEDMGFVGRGEAGAFIAEGHTRPGGRLPL NTHGGGLLYTHTGMYGMFAILESVRQLRGEAFRQVEHVRTSVVQGVGGMFTAAATLVLSNQSD >Mature_382_residues SRKQHAVAIAGAAETDLGALPQLSELDLRADAAHRALADAGLTLADVDGITSAVDSPIDVAHYLGITPSWYDGTSVGGCS FLVHVRHAAAAIHAGLCTTVLVLHGQSGRSHVGRVPRPAAPFTMAGQFETPYGVATPPNMFTLPMLRFMKETGTTHEQLA EVVVAQSHWAQGNPRASRNKLLTVGDVLASPMIAYPFHKLECCVVTDGGGALLITSAERARDLRRCGTPVYLRGAGESCD SPLVSMMDDMTRAKGFRLSSRAAFAQAGIRHADVDHLMIYDAFAHLPLYGLEDMGFVGRGEAGAFIAEGHTRPGGRLPLN THGGGLLYTHTGMYGMFAILESVRQLRGEAFRQVEHVRTSVVQGVGGMFTAAATLVLSNQSD
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI302344762, Length=234, Percent_Identity=24.3589743589744, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI19923233, Length=234, Percent_Identity=24.3589743589744, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI302344760, Length=234, Percent_Identity=24.3589743589744, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI19921506, Length=230, Percent_Identity=28.2608695652174, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24585051, Length=230, Percent_Identity=28.2608695652174, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 40654; Mature: 40523
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKQHAVAIAGAAETDLGALPQLSELDLRADAAHRALADAGLTLADVDGITSAVDSPID CCCCCCEEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCHH VAHYLGITPSWYDGTSVGGCSFLVHVRHAAAAIHAGLCTTVLVLHGQSGRSHVGRVPRPA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHCCCCCCCC APFTMAGQFETPYGVATPPNMFTLPMLRFMKETGTTHEQLAEVVVAQSHWAQGNPRASRN CCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC KLLTVGDVLASPMIAYPFHKLECCVVTDGGGALLITSAERARDLRRCGTPVYLRGAGESC CEEEHHHHHHCCHHHCCCCEEEEEEEECCCCEEEEECHHHHHHHHHCCCCEEEECCCCCC DSPLVSMMDDMTRAKGFRLSSRAAFAQAGIRHADVDHLMIYDAFAHLPLYGLEDMGFVGR CCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC GEAGAFIAEGHTRPGGRLPLNTHGGGLLYTHTGMYGMFAILESVRQLRGEAFRQVEHVRT CCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVQGVGGMFTAAATLVLSNQSD HHHHHCCHHHHHHHHHEEECCCC >Mature Secondary Structure SRKQHAVAIAGAAETDLGALPQLSELDLRADAAHRALADAGLTLADVDGITSAVDSPID CCCCCEEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCHH VAHYLGITPSWYDGTSVGGCSFLVHVRHAAAAIHAGLCTTVLVLHGQSGRSHVGRVPRPA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHCCCCCCCC APFTMAGQFETPYGVATPPNMFTLPMLRFMKETGTTHEQLAEVVVAQSHWAQGNPRASRN CCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC KLLTVGDVLASPMIAYPFHKLECCVVTDGGGALLITSAERARDLRRCGTPVYLRGAGESC CEEEHHHHHHCCHHHCCCCEEEEEEEECCCCEEEEECHHHHHHHHHCCCCEEEECCCCCC DSPLVSMMDDMTRAKGFRLSSRAAFAQAGIRHADVDHLMIYDAFAHLPLYGLEDMGFVGR CCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC GEAGAFIAEGHTRPGGRLPLNTHGGGLLYTHTGMYGMFAILESVRQLRGEAFRQVEHVRT CCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVQGVGGMFTAAATLVLSNQSD HHHHHCCHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]