Click here to switch to the map view.

The map label for this gene is rpoC

Identifier: 121602241

GI number:

Start: 582204

End: 586415

Strand: Direct

Name: rpoC

Synonym: BARBAKC583_0572

Alternate gene names: NA

Gene position: NA

Preceding gene: 121602831

Following gene: 121601888

Centisome position: NA

GC content: NA

Gene sequence:

>4212_bases
ATGAACCACGAGGTTATGAATCTTTTCAATCCTCAAGCGCTAGCACAGATATTTGACTCTATTCGTATATCGATTGCGAG
TCCTGAAAATATTCTATCCTGGTCGTACGGTGAGATCAAAAAGCCAGAAACTATTAATTACCGTACGTTTAAACCAGAGC
GCGATGGTCTTTTTTGTGCGCGTATATTTGGCCCTATTAAAGACTATGAATGTCTTTGTGGCAAATATAAACGTATGAAA
TACAAAGGCATTATTTGTGAAAAATGTGGTGTAGAAGTTACCCTTTCGCGAGTACGCCGTGAGCGCATGGGGCATATTGA
GCTTGCAGCGCCAGTTGCTCATATTTGGTTTCTTAAATCACTACCAGGCCGCATATCTACTCTTTTAGATTTAACTTTGA
AGGATATTGAAAGGATTCTGTATTTTGAAAGTTATATTGTAACAGAACCCGGGTTAACATCTCTTAAGCTACACCAGCTT
CTTTCTGAAGAAGAATATATGCTTGCTATTGATAAGTTTGGAGAAGATCAATTCACGGCGATGATTGGTGCTGAGGCTAT
TTATGATCTTCTCGCTGGGATGGAGTTAGATAAAATTGCGAACGATTTGCATGCTGAATTAGCAGAAACGACTTCAGAGT
TAAAGCAAAAAAAGCTCATTAAGCGGCTTAAAATTGTTGAAAATTTTCTTGAATCTGGTAATAAACCAGAATGGATGATT
ATGAAAACAATTCCGGTTATTCCACCGGATTTACGTCCGCTGGTTCCGCTTGATGGTGGACGTTTTGCAACATCGGATTT
AAATGATCTCTACCGGCGTGTTATAAATCGTAATAATCGTTTGAAGCGGCTTATTGAATTGCGTGCTCCTGGAATTATTG
TGCGTAATGAAAAACGTATGGTGCAGGAAGCTGTTGATGCGTTATTTGATAATGGCCGCCGTGGCCGTGTGATTACAGGG
GCAAATAAGCGTCCATTAAAGTCACTTTCAGATATGCTGAAGGGTAAACAGGGACGTTTCCGTCAAAATTTACTTGGGAA
GCGTGTTGATTATTCAGGTCGTTCTGTTATCGTGACGGGACCTGAATTGAAGTTGCATCAATGCGGTCTTCCGAAAAAGA
TGGCTCTTGAGTTGTTCAAGCCATTTATTTATGCGCGGCTTGATGCAAAGGGCTATTCATCCACTGTGAAGCAGGCAAAG
AAGCTTGTTGAAAAAGAACATCCAGAAGTTTGGGATATTTTGGATGAAGTTATTCGTGAACATCCTGTTTTGCTTAATCG
TGCGCCGACACTTCACCGTTTGGGGATTCAGGCCTTTGAGCCCGTGTTGATTGAGGGGAAAGCAATACAACTTCATCCAC
TCGTTTGTACTGCTTTTAATGCAGATTTTGATGGTGATCAGATGGCGGTTCACGTTCCGCTTTCGCTTGAAGCACAGCTG
GAAGCTCGTGTTTTGATGATGTCGACTAATAATATTCTTCATCCAGCCAATGGTGCGCCAATTATTGTTCCATCGCAAGA
CATGGTTCTTGGTCTTTACTATCTTTCGATTGTTTCTGAAAAAGAACCAGGAGAGGGGATGGCTTTCGCTGATATGGGTG
AGCTACATCACGCTTTGGAGAATAAAGTCGTAACTCTTCATACGAAAATTAAAGGTCGTTTTAAAAATATTGATAAAGAT
GGAAAAGAAGTTGCTCAACTCTACGATACGACGCCTGGTCGTTTAATTATTGGTGAATTGTTGCCAAAAAATCCAAATAT
TTCGTTTGATATCGTCAATCAGGAAATGACCAAAAAGAATCTTTCTAAGATGATTGATCAAGTTTATCGGCATTGTGGGC
AAAAAGAGACAGTTGTTTTCTGTGATCGTATTATGCAACTTGGTTTTTCTCATGCATGTCGTGCTGGGATTTCATTTGGT
AAAGACGATATGGTTATTCCTGAGAGTAAGTCACGTCTGGTTGCAGAAACGGAAGCTTTGGTTAAAGAATATGAACAGCA
ATATGATGACGGTTTAATTACACAAGGTGAAAAGTATAATAAGGTTGTTGATGCGTGGGGTAAGTGCACTGATCGTATTG
CAGATGAAATGATGAAGGGGATTCAAGCTGTTAAATTTGATCCTAAAACAGGTCGTCAGCAGAGAATGAATTCGATTTAT
ATGATGTCGCATTCTGGTGCACGTGGTTCTGCTAATCAGATGAGACAGTTAGCTGGTATGCGTGGATTGATGGCAAAGCC
ATCAGGTGAAATTATTGAAACACCAATCATTTCCAATTTTAAGGAAGGTCTGACTGTTAATGAGTATTTTAACTCAACGC
ATGGTGCGCGTAAGGGGCTTGCTGACACTGCGTTGAAAACTGCTAACTCAGGTTATTTAACACGGCGTCTTGTTGACGTT
GCCCAGGATGCTATTATTTCAGCAGTTGATTGTGGTACTATTAAGGGGCTTACCATGCAGCCAATTATTGATGCAGGACA
AATTGTTGCATCACTTGGTCAAAGAATTCTTGGTCGTACAGCACTTCTTGATATTTTGCATCCAGTTTCTGGTGAAGTCA
TTATTGAGGGAGGGACAATGATTGAGGAAGCTGATGTTCTTAAAATTGAAGAGGCTAGAATTCAATCAGTTCAGATCCGT
TCTGCTTTGACATGTGAGACGCGTCTTGGTGTTTGCGCTAAATGCTATGGTCGTGATTTGGCACGTGGAACACCGGTTAA
TCAGGGTGAAGCGGTTGGTGTTATTGCAGCTCAATCGATTGGTGAACCAGGAACACAGCTTACTATGCGTACTTTCCACT
TAGGTGGAACAGCGCAGGTTGTTGACTCATCTTATTTTGAATCCTCTTATGAAGGTATAGTAGAACTTCGTAATCGCAAT
GTTGTTCGCAATTCTGAAGGGCATTTGGTTGTGATGGGACGCAATATGGCTGTTCTTATCAAAGATGAAAACGGTAAAGA
GCGTGCTGTTCATCGTATTAGCTATGGTGCGCGTCTCTTTGTTGATGATGGTGATATTATTAAACGTGGTCAGCGTATAG
CTGAGTGGGATCCTTACACTCGTCCGATTCTAACTGAAGTTGATGGTTATGTGGGGTTTGAAGATATGGTTGATGGTTTA
TCAGTTACTGAAACAACTGATGAATCGACAGGAATTACAAAACGTCAGGTGATTGATTGGCGTGTTAACCCACGTGGTGC
TGATCTAAAACCAGCAATGATTATTCACTCAGATAAACAAGGTAAGAATATTGCTAAATTGCACAAAGGAGGAGAAGCCC
GTTATGTGATGTCAGTGGAAACTATTCTTTCTGTTGAACCTGGTTCGCATGTTAAGGCAGGCGATGTTATCGCACGCTTA
CCAATGGAAAGCGCCAAGACAAAAGATATTACAGGTGGTTTGCCGCGTGTAGCTGAGCTTTTTGAAGCACGGCGTCCAAA
GGATCATGCTATCATTGCTGAAATTAGTGGTACGGTTCGGTTTGGTCGTGGTTACAAGAATAAGCGTCGTATTATTATTG
AGCCTAATGATGAGACACTTGAACCAGTAGAATATTTGATCCCAAAGGGTAAGTTGTTCCATCTGCAAGAGGGTGATAAA
ATTGAAAAAGGTGATTATATCTTAGATGGTAATCCAGCACCTCATGATATTTTGGCGATTAAAGGTGTTGAAGCTTTGGC
ATCTTATCTGGTTAATGAAATTCAGGAAGTTTATCGTTTGCAGGGTGTTTTGATTAATGATAAACATATTGAAGTCATTG
TTCGTCAGATGTTGCAAAAGGTTGAAATTACTGAATCAGGAGATTCTGATTATATTCCAGGTGACAATGTTGACCGCATT
GAATTAGACGAAATTAATGATCATTTGATTGCAGAAGGTAAAAAACCTGCTTCTGGTACTCCTATACTTCTTGGAATTAC
GAAAGCATCTCTTCAGACACCGTCCTTCATTTCGGCAGCATCATTTCAGGAGACAACTCGGGTTCTTACTGAAGCAGCGG
TTTCTGGCAAAATTGATACTTTACAAGGGCTTAAGGAAAATGTCATCGTCGGTAGGCTTATTCCTGCAGGTACGGGTGGT
ACAATCGCTCAAATTCGTCGTATTGCTACTGTTCGTGATGATTTGATTGTAGATGAACAGCGCAAATCTAGCAATGATGG
AATATCTAAAGCTATGTTAACAGATATGACAGCAAATGCGGCCGCTGAATAA

Upstream 100 bases:

>100_bases
TTTTAAAAGATAATAATACAGACGATTTTTGCAGTAGAAATGAATTTCTAGTAAAGCTGTGATAGAAGGAAGAGCTTAAG
AATCTTCAAAGGAGAACGGA

Downstream 100 bases:

>100_bases
TTTTAATAGATGTTAGAAAAAATGTGAAAACGCCTGAATGAAATTCAGGCGTTTTTTATGCTTTAGAATGCGGGAATAAA
TAGAAGTTTTTTCATAAATA

Product: DNA-directed RNA polymerase subunit beta'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1403_residues
MNHEVMNLFNPQALAQIFDSIRISIASPENILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMK
YKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPGRISTLLDLTLKDIERILYFESYIVTEPGLTSLKLHQL
LSEEEYMLAIDKFGEDQFTAMIGAEAIYDLLAGMELDKIANDLHAELAETTSELKQKKLIKRLKIVENFLESGNKPEWMI
MKTIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRMVQEAVDALFDNGRRGRVITG
ANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAK
KLVEKEHPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIVSEKEPGEGMAFADMGELHHALENKVVTLHTKIKGRFKNIDKD
GKEVAQLYDTTPGRLIIGELLPKNPNISFDIVNQEMTKKNLSKMIDQVYRHCGQKETVVFCDRIMQLGFSHACRAGISFG
KDDMVIPESKSRLVAETEALVKEYEQQYDDGLITQGEKYNKVVDAWGKCTDRIADEMMKGIQAVKFDPKTGRQQRMNSIY
MMSHSGARGSANQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGLADTALKTANSGYLTRRLVDV
AQDAIISAVDCGTIKGLTMQPIIDAGQIVASLGQRILGRTALLDILHPVSGEVIIEGGTMIEEADVLKIEEARIQSVQIR
SALTCETRLGVCAKCYGRDLARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYFESSYEGIVELRNRN
VVRNSEGHLVVMGRNMAVLIKDENGKERAVHRISYGARLFVDDGDIIKRGQRIAEWDPYTRPILTEVDGYVGFEDMVDGL
SVTETTDESTGITKRQVIDWRVNPRGADLKPAMIIHSDKQGKNIAKLHKGGEARYVMSVETILSVEPGSHVKAGDVIARL
PMESAKTKDITGGLPRVAELFEARRPKDHAIIAEISGTVRFGRGYKNKRRIIIEPNDETLEPVEYLIPKGKLFHLQEGDK
IEKGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEITESGDSDYIPGDNVDRI
ELDEINDHLIAEGKKPASGTPILLGITKASLQTPSFISAASFQETTRVLTEAAVSGKIDTLQGLKENVIVGRLIPAGTGG
TIAQIRRIATVRDDLIVDEQRKSSNDGISKAMLTDMTANAAAE

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA