Definition | Bartonella bacilliformis KC583, complete genome. |
---|---|
Accession | NC_008783 |
Length | 1,445,021 |
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The map label for this gene is rpoB
Identifier: 121602831
GI number:
Start: 577891
End: 582042
Strand: Direct
Name: rpoB
Synonym: BARBAKC583_0571
Alternate gene names: NA
Gene position: NA
Preceding gene: 121601836
Following gene: 121602241
Centisome position: NA
GC content: NA
Gene sequence:
>4152_bases ATGGCTCAGACTCTAGCAATGATGTCTCAATTCAATGGTCGTAAGCGCGTGCGCAAATTTTTTGGTAAGATTCCTGAAGT CGCAGAGATGCCGAATCTTATTGAGGTTCAGAAAGCGTCATATGATCAATTTCTCATGATTAAAGAGCCGAAAGGTGGGC GTCCAGATGAAGGTCTGCAAGCTGTTTTTAAATCGGTATTTCCTATTTCGGATTTTTCCGGTACAGCTATGCTCGAATTT GTGCGTTACGAATTTGATGCACCAAAGTTTGATGTTGAAGAATGTCGTCAGCGCGATCTAACTTATGCAGCACCATTAAA GGTGATATTACGCTTAATCGTATTTGATATTGATGAAGATACCGGTTCTAAAGATATTAAGGATATCAAAGAGCAGGGTG TCTATATGGGCGATATGCCTTTAATGACGAGTAATGGTACTTTTATCATTAACGGTACAGAGCGTGTTATTGTTTCGCAG ATGCATCGTTCTCCCGGTGTGTTTTTTGATCATGATAAAGGAAAATCTCATTCGTCAGGAAAGGTTCTTTTTGCAGCCCG TGTAATTCCCTATCGTGGTTCTTGGTTAGATATTGAATTTGATGCGAAAGATATCGTTTATGCTCGCATTGATCGGAGAC GAAAGATTCCGGTTACTAGCTTTCTGATGGCATTGGGTATGGATGCATCGGATATTTTGTCAACCTTTTATAATAAAGTT ACTTATGAGCGGGTTGAAAGTGGGTGGCGTATTCCTTATTCAGTGGATCGCTTTAAGGGAGTAAAATTGGTTTCTGATCT TGTTGATGCAGAGAGTGGAGAGGTTGTTGCTGAGGCTGGTAAAAAGCTAACAGCTCGCACTGCAAAGCTTTTAGTAGAAA AGGGTCTAAAGGCGATTAGAGTCAGTGAAGATGAATTATTAGGGTCTTATTTAGCGGATGATATCGTTAATTATGAAACA GGTGAGATTTATCTTGAAGCTGGTGATGAAATTGATGAAAAAGTATTAAAAGTTTTATTTGATGTTGGTGCTAATCAAAT CAATATTCTTGATATTGATCACATGAGTGTTGGAGCATATATCCGCAATACTTTAAAAGTAGATAAAAATGAAAGTCGGC AAGATGCGTTATTTGATATTTATCGGGTGATGCGTCCAGGAGAACCACCAACAATAGATACAGCGGAAGCTATGTTCCAC TCGTTGTTTTTTGATTCTGAGCGTTATGATCTTTCGGCTGTTGGTCGTGTTAAGATGAATTTGCGTATGGGGCTTGATTG CCCTGATACGGTTCGTGTTTTGCGTCAAGAAGATATTATTGGTGTTGTTAAGATGCTGGTTGAATTGCGCGATGGCCGTG GTGAAATTGATGATATCGACAATCTTGGTAATCGTCGTGTTCGATCAGTTGGGGAATTGATGGAAAATCAATATCGGGTT GGTTTGCTTCGTATGGAGCGTGCGATAAAGGAACGCATGTCTTCAGTTGAAATTGATACTGTTATGCCACAAGATTTGAT TAATGCGAAACCAGCTGCGGCAGCTGTTCGCGAGTTTTTTGGGTCTTCGCAATTATCGCAGTTTATGGATCAAACTAATC CATTATCAGAAATTACTCATAAACGTCGTCTTTCTGCTCTTGGGCCAGGTGGTTTAACTCGTGAGCGTGCAGGTTTTGAA GTGCGCGATGTGCATCCTACGCATTATGGTCGTATTTGTCCGATTGAAACGCCTGAAGGTCCAAATATTGGATTGATTAA TTCTTTAGCGACTTTTGCGCGAGTTAATAAATATGGTTTCATTGAGAGTCCATATCGCAAAATTACCGATGGTAAAGTGA CGACTGAGGTTGTTTATCTTTCTGCTATGGAAGAAGCAAAACATTATGTAGCTCAAGCCAATTCTTCACTAGATTCAGAA GGACGTTTCACAGAAGAGTTTGTAGTTTGTCGTCATGCAGGTGAAGTTTTGATGGTGCCACGTGATCACATAGATTTAAT GGATGTTTCACCAAAACAGTTGGTTTCTGTAGCTGCTTCTCTTATTCCATTTTTGGAAAATGATGATGCGAATCGTGCGT TAATGGGATCAAACATGCAACGTCAAGCAGTTCCATTGATCCGTTCTGAAGCACCATTTGTTGGTACAGGTATGGAGGCA ATAGTGGCTCGTGATTCAGGTGCTGCTATTAGTGCAAAACGTGGTGGTATTGTTGATCAAGTTGATGCAACACGTATTGT TATTCGTGCAACAGAAGATTTAGATCCTTCAAAATCTGGTGTTGATATTTATCGCTTGCAAAAATTTCAGCGTTCCAATC AATCTACATGTATTAATCAGCGTCCTCTTGTACATGTTGGTGACCGGATAGAAAAGGGTGATATCATTGCTGATGGTCCA TCAACTGATCTTGGTGATTTAGCTCTTGGGCGGAATGTTCTTGTAGCATTTATGCCTTGGAATGGGTACAATTACGAAGA CTCTATTTTGCTTTCTGAGCGTATCGTTGCTGATGATGTATTTACTTCGATTCATATTGAAGAATTTGAAGTTGCTGCAC GTGATATGAAACTTGGGCCGGAAGAGATTACTCGTGATATTCCTAATGTTGCAGAAGAGGCATTAAGGAATCTTGATGAA GCTGGTATTGTCTATATTGGTGCTGAAGTTCAACCTGGTGATATTTTGGTTGGTAAAATTACCCCAAAAGGCGAAAGCCC AATGACACCAGAAGAAAAGCTTTTGCGTGCAATTTTTGGTGAAAAGGCCTCAGATGTTCGTGATACTTCTATGCGAATGC CTCCAGGAACTTTTGGGACTGTTGTAGAGGTTCGTGTTTTTAACCGTCATGGTGTAGAAAAAGATGAACGCGCAATGGAG ATTGAGCGTGAAGAAATTGAGCGTTTAGCTAAAGATAGAGATGATGAACAGTCGATTCTTGATAGGAATGTTTATGCGCG TCTTGCAGGTATGTTAAAAGACAAGAGTGCAATAAGAGGTCCAAAAGGGTTTGAAAAAGGCCAGAAAATTGATAGCACAG TACTGAATAATTATCCACGGTCACAATGGTGGCAATTTGCTGTTGATGATGAAAAGGTTCAAAATAAAATTGAAGCTTTG TGCAATCAATATGATGAGTCGAAAGAGGCGTTACAACGTCGCTTTATGGATAAGGTCGAAAAAGTTCAACGGGGCGATGA GATGCCTCCTGGCGTCATGAAAATGGTAAAAGTTTTTGTGGCTGTGAAGCGCAAAATTCAACCTGGTGATAAAATGGCAG GACGTCACGGTAATAAGGGAGTTGTATCGCGTATTCTTCCGGTGGAAGATATGCCATTTCTTGAAGATGGAACCCATGCT GATATTGTATTGAATCCATTAGGTGTTCCTAGCCGTATGAATGTTGGTCAAATTCTTGAAACACATCTTGGTTGGGCATG CGCAGGTATGGGAAAAAAGATTGGAGATTTGGTAGACTTTTATCAAGAAACTGGAGATATACTTCCTCTGCGTCAGCGTA TTGAAAATCTCATTCCTGATAATGATCGTAATGAGCCAGTACGTCAGTATGATGATGAAAGTCTTGTTAAATTGGCGCAT CAGATGAGAAAGGGTGTTTCAATTGCAACGCCTGTTTTTGATGGAGCGCATGAAGCTGATATTAATGCGATGCTAGAAGA TGCAGGTTTAGATAGTTCTGGACAGGTTACACTTTATGATGGTCGTACTGGAGAGCCTTTTGATCGTCAGGTGACAGTAG GTTATATCTATATGCTTAAATTGCATCATCTTGTTGATGATAAGATTCATGCTCGTTCAATAGGACCTTATTCACTTGTT ACACAACAGCCATTAGGTGGTAAAGCGCAATTTGGTGGTCAGCGTTTTGGTGAAATGGAAGTTTGGGCTCTTGAGGCTTA CGGTGCTGCGTATACTTTGCAAGAGATGCTGACAGTTAAATCAGATGACGTAGCGGGTCGTACAAAAGTTTATGAAGCAA TTGTTCGTGGTGATGATACTTTTGAAGCAAGTATACCTGAAAGCTTTAACGTTCTGATCAAAGAAATGCGTTCACTTGGT TTGAATGTAAAGCTTGGCGATGCACGTGAATTTATGGCGCAGCAAGCATTACCTGAAGTGGTAGAAAATTAG
Upstream 100 bases:
>100_bases TTTGACAGGGTATTAAATAAACGGGTCTGTATGTGCAGACTAATGACGTAAAGCTTTCAAGGTTTAGTCTACTTTGAATA GTGAAAATCGAGGAGCGACG
Downstream 100 bases:
>100_bases TTGTAAGAGCGCACTGAGAATTGTGCGCTCTGATTTTCCTTAAAAACTCTAATAAAGAAGTTTTTAAAAGATAATAATAC AGACGATTTTTGCAGTAGAA
Product: DNA-directed RNA polymerase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1383_residues MAQTLAMMSQFNGRKRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMIKEPKGGRPDEGLQAVFKSVFPISDFSGTAMLEF VRYEFDAPKFDVEECRQRDLTYAAPLKVILRLIVFDIDEDTGSKDIKDIKEQGVYMGDMPLMTSNGTFIINGTERVIVSQ MHRSPGVFFDHDKGKSHSSGKVLFAARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSFLMALGMDASDILSTFYNKV TYERVESGWRIPYSVDRFKGVKLVSDLVDAESGEVVAEAGKKLTARTAKLLVEKGLKAIRVSEDELLGSYLADDIVNYET GEIYLEAGDEIDEKVLKVLFDVGANQINILDIDHMSVGAYIRNTLKVDKNESRQDALFDIYRVMRPGEPPTIDTAEAMFH SLFFDSERYDLSAVGRVKMNLRMGLDCPDTVRVLRQEDIIGVVKMLVELRDGRGEIDDIDNLGNRRVRSVGELMENQYRV GLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFE VRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKITDGKVTTEVVYLSAMEEAKHYVAQANSSLDSE GRFTEEFVVCRHAGEVLMVPRDHIDLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLIRSEAPFVGTGMEA IVARDSGAAISAKRGGIVDQVDATRIVIRATEDLDPSKSGVDIYRLQKFQRSNQSTCINQRPLVHVGDRIEKGDIIADGP STDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSIHIEEFEVAARDMKLGPEEITRDIPNVAEEALRNLDE AGIVYIGAEVQPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAME IEREEIERLAKDRDDEQSILDRNVYARLAGMLKDKSAIRGPKGFEKGQKIDSTVLNNYPRSQWWQFAVDDEKVQNKIEAL CNQYDESKEALQRRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSRILPVEDMPFLEDGTHA DIVLNPLGVPSRMNVGQILETHLGWACAGMGKKIGDLVDFYQETGDILPLRQRIENLIPDNDRNEPVRQYDDESLVKLAH QMRKGVSIATPVFDGAHEADINAMLEDAGLDSSGQVTLYDGRTGEPFDRQVTVGYIYMLKLHHLVDDKIHARSIGPYSLV TQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEASIPESFNVLIKEMRSLG LNVKLGDAREFMAQQALPEVVEN
Sequences:
NA
Specific function: NA
COG id: COG0085
COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA