Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639749
Identifier: 121639749
GI number: 121639749
Start: 4278159
End: 4278641
Strand: Direct
Name: 121639749
Synonym: BCG_3894
Alternate gene names: NA
Gene position: 4278159-4278641 (Clockwise)
Preceding gene: 121639744
Following gene: 121639751
Centisome position: 97.8
GC content: 62.11
Gene sequence:
>483_bases ATGGTGTCGCTTCTTGTTCACGCTGCGCTGGGAGTAGTCGTCATCGGCTGGATCGTCTCGTCGAACCCGAAGGTTTTCAC CAGGCCGGCCGGCGGATCGTGGTTCTCGCTGCCGGAGTGTGTGTACTACGTCGTCGGTATTGCCTCGATCGCGCTGGGGT GGTACTTCAACATTCGTTTTGTGCAGCAGTACGCGCACGGAGCCGCCAACCCTCTCTGGGGTCCCGGCAGCTGGGCGGAG TACGTCCGGCTGATGTTCACCAACCCGGCGGCCAGTTCGGCCGGCCAGGACTACACCATTGCCAACGTGATCCTGCTGCC GCTGTTTTCCACCACCGACGGCTACCGACGTGGTCTGCGGCGGCCCTGGCTGTATTTCGTGAGCAGCCTGTTCACCAGTT TTGCATTCGCGTTCGCGTTCTACTTCGCCACCATCGAACGTCAGCACCGACACGAACGTTCCCGTGCGACGGTCGGCGCC TAG
Upstream 100 bases:
>100_bases CTGCGCGCCGTCTGCGGGGGCCGGACCATGACTGCAAGCTATCGTCAATTTTCGTTCTGTCAACATTGACAAAACTGTTG GCCACGGCGAGACTGCGCGC
Downstream 100 bases:
>100_bases GCGGCGACTGGCTTGGTGGCCCGCCACCTCAGGCGAGCGCCCGCGACATCGACGTGGATATCAGTGAATCCCACAGCTCG CAGCCGACCGGGGAGGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MVSLLVHAALGVVVIGWIVSSNPKVFTRPAGGSWFSLPECVYYVVGIASIALGWYFNIRFVQQYAHGAANPLWGPGSWAE YVRLMFTNPAASSAGQDYTIANVILLPLFSTTDGYRRGLRRPWLYFVSSLFTSFAFAFAFYFATIERQHRHERSRATVGA
Sequences:
>Translated_160_residues MVSLLVHAALGVVVIGWIVSSNPKVFTRPAGGSWFSLPECVYYVVGIASIALGWYFNIRFVQQYAHGAANPLWGPGSWAE YVRLMFTNPAASSAGQDYTIANVILLPLFSTTDGYRRGLRRPWLYFVSSLFTSFAFAFAFYFATIERQHRHERSRATVGA >Mature_160_residues MVSLLVHAALGVVVIGWIVSSNPKVFTRPAGGSWFSLPECVYYVVGIASIALGWYFNIRFVQQYAHGAANPLWGPGSWAE YVRLMFTNPAASSAGQDYTIANVILLPLFSTTDGYRRGLRRPWLYFVSSLFTSFAFAFAFYFATIERQHRHERSRATVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17868; Mature: 17868
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLLVHAALGVVVIGWIVSSNPKVFTRPAGGSWFSLPECVYYVVGIASIALGWYFNIRF CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VQQYAHGAANPLWGPGSWAEYVRLMFTNPAASSAGQDYTIANVILLPLFSTTDGYRRGLR HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCC RPWLYFVSSLFTSFAFAFAFYFATIERQHRHERSRATVGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVSLLVHAALGVVVIGWIVSSNPKVFTRPAGGSWFSLPECVYYVVGIASIALGWYFNIRF CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VQQYAHGAANPLWGPGSWAEYVRLMFTNPAASSAGQDYTIANVILLPLFSTTDGYRRGLR HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCC RPWLYFVSSLFTSFAFAFAFYFATIERQHRHERSRATVGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA