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The map label for this gene is 121639715

Identifier: 121639715

GI number: 121639715

Start: 4225396

End: 4226730

Strand: Direct

Name: 121639715

Synonym: BCG_3860

Alternate gene names: NA

Gene position: 4225396-4226730 (Clockwise)

Preceding gene: 121639714

Following gene: 121639727

Centisome position: 96.59

GC content: 67.04

Gene sequence:

>1335_bases
GTGCGCAATGTGAGGCTATTTCGTGCGCTGCTGGGTGTCGACAAGCGCACCGTGATTGAGGACATCGAATTCGAGGAGGA
TGACGCCGGAGACGGTGCGCGGGTGATCGCCCGGGTGCGGCCACGAAGTGCAGTGTTGCGCCGCTGTGGTCGCTGCGGTC
GCAAGGCGTCCTGGTATGACCGCGGTGCGGGCCTGCGCCAATGGCGCAGTCTGGATTGGGGCACCGTCGAGGTGTTCTTG
GAGGCCGAGGCGCCGCGGGTGAACTGCCCCACCCATGGGCCGACGGTGGTGGCGGTGCCGTGGGCGCGTCATCATGCCGG
GCACACGTATGCTTTCGATGACACGGTGGCCTGGCTGGCGGTGGCGTGTTCGAAGACCGCGGTGTGCGAGTTGATGCGGA
TCGCCTGGCGCACCGTCGGGGCGATCGTGGCCCGGGTCTGGGCCGACACCGAAAAGCGCATTGACCGGTTCGCGAACTTG
CGCCGCATCGGTATCGATGAGATCTCCTACAAGCGCCACCACCGGTACCTGACGGTGGTCGTCGATCACGACAGCGGCCG
GTTGGTGTGGGCCGCCCCGGGCCACGACAAGGCCACCCTGGGCTTGTTCTTCGATGCCCTGGGCGCTGAGCGGGCCGCCC
AGATTACTCACGTTTCGGCCGATGCCGCGGACTGGATCGCTGACGTGGTCACCGAGCGCTGCCCGGATGCGATTCAATGC
GCCGATCCGTTTCATGTGGTGGCCTGGGCCACCGAGGCGCTCGACGTCGAGCGGCGCCGAGCCTGGAACGACGCACGGGC
GATCGCGCGCACCGAACCCAAGTGGGGCCGGGGCCGGCCCGGTAAGAACGCCGCACCACGTCCGGGCCGCGAGCGGGCAC
GGCGGCTCAAGGGCGCCCGCTACGCGCTGTGGAAGAACCCCGAGGACCTCACCGAACGCCAAAGCGCCAAACTGGCCTGG
ATCGCCAAGACCGATCCCCGTCTGTATCGCGCCTACCTGCTCAAAGAGAGCCTGCGGCATGTGTTTTCGGTCAAGGGCGA
GGAAGGTAAACAGGCCCTGGACCGGTGGATCTCCTGGGCCCAGCGCTGTCGCATCCCGGTATTCGTCGAGCTTGCCGCCC
GCATCAAACGCCACCGGGTGGCCATCGACGCCGCCCTCGACCACGGCCTATCCCAAGGCCTGATCGAATCCACCAACACC
AAGATCCGCCTACTGACCCGGATCGCGTTCGGATTCCGCTCACCACAAGCCCTCATCGCCCTAGCCATGCTCACCCTCGC
CGGCCACCGCCCCACCCTGCCAGGCCGACACAACCACCCACAGATCAGTCAGTAG

Upstream 100 bases:

>100_bases
CACTTCCGTGGGTGAGTTTGTGTCCTGAGTAGGCGCACGTCGTTGTGGCTTAAGGTTTCTGGCTTGTCAAGGATCAGAAA
CACAAGGAGCCGACAACGAC

Downstream 100 bases:

>100_bases
AGCCCAATTCGTACCGAATTTGGGGGCTTTTACGTCTGCTCGCGCTACCCAGCTAGACCGGGATCAGGCCGTGCTTGCGG
CCCACCCGCCACCACAGCTG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVEVFL
EAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANL
RRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAW
IAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNT
KIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ

Sequences:

>Translated_444_residues
MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVEVFL
EAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANL
RRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAW
IAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNT
KIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ
>Mature_444_residues
MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVEVFL
EAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANL
RRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAW
IAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNT
KIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TS57_MYCTU (Q10621)

Other databases:

- EMBL:   BX842576
- EMBL:   BX842584
- EMBL:   AE000516
- EMBL:   AE000516
- PIR:   E70775
- RefSeq:   NP_215829.1
- RefSeq:   NP_218315.1
- RefSeq:   NP_335801.1
- RefSeq:   NP_338457.1
- EnsemblBacteria:   EBMYCT00000000602
- EnsemblBacteria:   EBMYCT00000001013
- EnsemblBacteria:   EBMYCT00000070204
- EnsemblBacteria:   EBMYCT00000072003
- GeneID:   886268
- GeneID:   886922
- GeneID:   922600
- GeneID:   923230
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1353
- KEGG:   mtc:MT3905
- KEGG:   mtu:Rv1313c
- KEGG:   mtu:Rv3798
- TIGR:   MT1353
- TIGR:   MT3905
- TubercuList:   Rv1313c
- TubercuList:   Rv3798
- GeneTree:   EBGT00050000018459
- HOGENOM:   HBG567721
- OMA:   WARRCRL
- ProtClustDB:   CLSK791093
- InterPro:   IPR002560

Pfam domain/function: PF01610 Transposase_12

EC number: NA

Molecular weight: Translated: 50186; Mature: 50186

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
CCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHEECCCHHHHHHHHHHCCCCCCHHH
RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
CCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHCCCCEEEEHHHHHHHH
VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEE
VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
EECCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHEECCCHHHHHHHHHHHHHCCCHHHC
ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCE
YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA
EEECCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHH
LAMLTLAGHRPTLPGRHNHPQISQ
HHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
CCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHEECCCHHHHHHHHHHCCCCCCHHH
RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
CCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHCCCCEEEEHHHHHHHH
VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEE
VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
EECCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHEECCCHHHHHHHHHHHHHCCCHHHC
ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCE
YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA
EEECCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHH
LAMLTLAGHRPTLPGRHNHPQISQ
HHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036