Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639680
Identifier: 121639680
GI number: 121639680
Start: 4184695
End: 4185384
Strand: Direct
Name: 121639680
Synonym: BCG_3825
Alternate gene names: NA
Gene position: 4184695-4185384 (Clockwise)
Preceding gene: 121639677
Following gene: 121639682
Centisome position: 95.66
GC content: 62.32
Gene sequence:
>690_bases ATGCGCTCGGCATTCGACAGCGGGCGACTCACATTCGGAATCGTCTACACCTACGCCCGTCCGAATTGGTGGGCCAATGC CAACACCGTGCGCTCGATGATCGACGCAGCGGGCGGCTTGCATCCCCGGGTCGCGCTGATGCTGGATGTCGAATCAGGCG GGAACCCGCCCGGTGACGGGTCGAGCTGGATCAACCGGCTGTACTGGAACCTGGCAGACTACGCCGGCTCGCCCGTGCGA ATCATCGGTTATGCCAACGCCTACGACTTCTTCAACATGTGGCGTGTTCGCCCGGCGGGCCTGCGCGTCATTGGCGCGGG TTATGGTTCCAATCCGAACCTTCCCGGACAAGTGGCGCACCAGTACACCGACGGCAGTGGGTATAGCCCCAATCTTCCAC AGGGCGCTCCACCGTTCGGTCGATGCGATATGAACTCTGCCAACGGACTAACACCGCAACAGTTTGCCGCCGCATGCGGC GTCACAACGACCGGAGGACCGCTGATGGCACTCACCGACGAAGAACAAACCGAACTACTGACCAAAGTCCGCGAGATATG GGACCAACTGCGCGGGCCCAACGGCGCCGGGTGGCCTCAGCTCGGACAGAACGAACAGGGCCAGGACCTCACTCCGGTTG ACGCGATAGCGGTGATCAAGAACGACGTGGCGGCCATGCTCGCGGAATAG
Upstream 100 bases:
>100_bases TCAAGTGCCCGTGAATAACTCGTATCCCTACCGAGTGCTGTCGATCCGCGTCTGCGACGGCACCTATCGGGATCGTAATT TCGCGCACAACTACCGATGG
Downstream 100 bases:
>100_bases CCCGCGATCTCCGTCAGCTCGTGGCCCGCTGCGCGGATACGAAAAGGTTTGGCGGGATTGAGTCTTCGCCACTGTGAGGG ATGCTGCGGCCATACCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDGSSWINRLYWNLADYAGSPVR IIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACG VTTTGGPLMALTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Sequences:
>Translated_229_residues MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDGSSWINRLYWNLADYAGSPVR IIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACG VTTTGGPLMALTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE >Mature_229_residues MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDGSSWINRLYWNLADYAGSPVR IIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACG VTTTGGPLMALTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24606; Mature: 24606
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCH SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHH QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCHHHHHH TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCH SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHH QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCHHHHHH TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA