Click here to switch to the map view.

The map label for this gene is lpqH

Identifier: 121639677

GI number: 121639677

Start: 4181449

End: 4181928

Strand: Direct

Name: lpqH

Synonym: BCG_3822

Alternate gene names: 121639677

Gene position: 4181449-4181928 (Clockwise)

Preceding gene: 121639674

Following gene: 121639680

Centisome position: 95.59

GC content: 64.38

Gene sequence:

>480_bases
GTGAAGCGTGGACTGACGGTCGCGGTAGCCGGAGCCGCCATTCTGGTCGCAGGTCTTTCCGGATGTTCAAGCAACAAGTC
GACTACAGGAAGCGGTGAGACCACGACCGCGGCAGGCACGACGGCAAGCCCCGGCGCCGCCTCCGGGCCGAAGGTCGTCA
TCGACGGTAAGGACCAGAACGTCACCGGCTCCGTGGTGTGCACAACCGCGGCCGGCAATGTCAACATCGCGATCGGCGGG
GCGGCGACCGGCATTGCCGCCGTGCTCACCGACGGCAACCCTCCGGAGGTGAAGTCCGTTGGGCTCGGTAACGTCAACGG
CGTCACGCTGGGATACACGTCGGGCACCGGACAGGGTAACGCCTCGGCAACCAAGGACGGCAGCCACTACAAGATCACTG
GGACCGCTACCGGGGTCGACATGGCCAACCCGATGTCACCGGTGAACAAGTCGTTCGAAATCGAGGTGACCTGTTCCTAA

Upstream 100 bases:

>100_bases
AATTTTCCGCCGCACCTAGACCTCGGGCCCTGCTAACGCGCATACTGCCGAAGCGGTCCTCAATGCCGATGGACCGCTAC
GACAGGCAAAGGAGCACAGG

Downstream 100 bases:

>100_bases
CCTAAAGCGTGTCGATGCGGGCTGTGAACAGCGCGTCGGAGCCGGGCAGTCAGGCCTAGCGCGGCGACGATTCGAGCGGT
TGCCATCCGTCAAGTGGCAA

Product: 19 kDa lipoprotein antigen precursor lpqH

Products: NA

Alternate protein names: 19 kDa lipoprotein antigen

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKRGLTVAVAGAAILVAGLSGCSSNKSTTGSGETTTAAGTTASPGAASGPKVVIDGKDQNVTGSVVCTTAAGNVNIAIGG
AATGIAAVLTDGNPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSHYKITGTATGVDMANPMSPVNKSFEIEVTCS

Sequences:

>Translated_159_residues
MKRGLTVAVAGAAILVAGLSGCSSNKSTTGSGETTTAAGTTASPGAASGPKVVIDGKDQNVTGSVVCTTAAGNVNIAIGG
AATGIAAVLTDGNPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSHYKITGTATGVDMANPMSPVNKSFEIEVTCS
>Mature_159_residues
MKRGLTVAVAGAAILVAGLSGCSSNKSTTGSGETTTAAGTTASPGAASGPKVVIDGKDQNVTGSVVCTTAAGNVNIAIGG
AATGIAAVLTDGNPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSHYKITGTATGVDMANPMSPVNKSFEIEVTCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial 19 kDa antigen family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPQH_MYCBO (P0A5J1)

Other databases:

- EMBL:   X15803
- EMBL:   BX248347
- PIR:   S11234
- RefSeq:   NP_857426.1
- EnsemblBacteria:   EBMYCT00000017586
- GeneID:   1093295
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb3789
- GeneTree:   EBGT00050000016259
- HOGENOM:   HBG659001
- OMA:   NKPFEIE
- ProtClustDB:   CLSK792704
- BioCyc:   MBOV233413:MB3789-MONOMER
- InterPro:   IPR008691

Pfam domain/function: PF05481 Myco_19_kDa

EC number: NA

Molecular weight: Translated: 15147; Mature: 15147

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGLTVAVAGAAILVAGLSGCSSNKSTTGSGETTTAAGTTASPGAASGPKVVIDGKDQN
CCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCC
VTGSVVCTTAAGNVNIAIGGAATGIAAVLTDGNPPEVKSVGLGNVNGVTLGYTSGTGQGN
CEEEEEEEEECCCEEEEECCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCC
ASATKDGSHYKITGTATGVDMANPMSPVNKSFEIEVTCS
CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MKRGLTVAVAGAAILVAGLSGCSSNKSTTGSGETTTAAGTTASPGAASGPKVVIDGKDQN
CCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCC
VTGSVVCTTAAGNVNIAIGGAATGIAAVLTDGNPPEVKSVGLGNVNGVTLGYTSGTGQGN
CEEEEEEEEECCCEEEEECCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCC
ASATKDGSHYKITGTATGVDMANPMSPVNKSFEIEVTCS
CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2230723; 12788972