Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639633
Identifier: 121639633
GI number: 121639633
Start: 4134616
End: 4135341
Strand: Direct
Name: 121639633
Synonym: BCG_3777
Alternate gene names: NA
Gene position: 4134616-4135341 (Clockwise)
Preceding gene: 121639629
Following gene: 121639635
Centisome position: 94.52
GC content: 66.39
Gene sequence:
>726_bases ATGATAGTCGGGGTACTCGTCGCAGCAGCGACGCCGATCATCTCGTCCGCGAGCGCAACCCCCGCCAACATCGCCGGCAT GGTCGTCTTCATCGACCCCGGACACAACGGAGCCAACGACGCATCGATCGGCCGCCAGGTACCCACCGGTCGCGGCGGCA CCAAGAACTGCCAGGCCAGCGGAACGTCAACCAACAGCGGCTACCCGGAGCACACCTTCACCTGGGAAACCGGGCTGCGG CTGCGGGCCGCGTTGAACGCATTGGGGGTTCGGACCGCCCTGTCACGTGGCAACGACAACGCGCTCGGACCGTGTGTCGA TGAGCGCGCCAATATGGCCAACGCGTTGCGCCCCAACGCGATCGTGAGCCTGCACGCCGACGGCGGACCGGCGTCTGGCC GCGGATTCCACGTCAACTACTCGGCCCCGCCGCTCAACGCGATACAGGCCGGTCCCTCGGTTCAGTTCGCTCGAATCATG CGCGACCAGCTGCAGGCCTCGGGCATTCCGAAGGCGAACTACATCGGCCAGGACGGCCTGTACGGACGTTCGGACTTGGC CGGCCTGAACCTAGCCCAATATCCGTCGATCCTGGTCGAGTTGGGCAACATGAAGAACCCCGCGGACTCGGCGCTGATGG AGTCCGCCGAGGGCAGGCAAAAATACGCCAACGCCCTGGTTCGCGGCGTCGCCGGCTTCCTGGCCACCCAGGGCCAGGCG CGTTAG
Upstream 100 bases:
>100_bases TCGCCTGTGGTTGTCGGGCGATTCGGAACATTCAGCCTAGACCGCGCCGCGTTACCTTTGCGCCGTGGACCTACGAGTTG GCCCGCGTGTCGGGTTCGCC
Downstream 100 bases:
>100_bases CCCCGCACACAGGCGGCACCCCCACCGCGCCCGCATCGTCGTCAGGCGTCACCCTCGAGTTCGGTCTTGAGGTTGGACAG CACCTCGGCCTGGATCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; N-Acetymuramyl-L-Alanine Amidase; Glutaminase; Hydrolase; N-Acetylmuramoyl-L-Alanine Amidase-Like Protein; N-Acetymuramyl-L-Alanine Amidase-Related Protein; Cell Wall Glycoprotein Hydrolase; Secreted Protein
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MIVGVLVAAATPIISSASATPANIAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLR LRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIM RDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQGQA R
Sequences:
>Translated_241_residues MIVGVLVAAATPIISSASATPANIAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLR LRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIM RDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQGQA R >Mature_241_residues MIVGVLVAAATPIISSASATPANIAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLR LRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIM RDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQGQA R
Specific function: Unknown
COG id: COG0860
COG function: function code M; N-acetylmuramoyl-L-alanine amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24836; Mature: 24836
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVGVLVAAATPIISSASATPANIAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQAS CCEEEEEHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNA CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCE IVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGL EEEEECCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC YGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQGQA CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC R C >Mature Secondary Structure MIVGVLVAAATPIISSASATPANIAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQAS CCEEEEEHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNA CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCE IVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGL EEEEECCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC YGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQGQA CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA