Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639635
Identifier: 121639635
GI number: 121639635
Start: 4135874
End: 4137286
Strand: Direct
Name: 121639635
Synonym: BCG_3779
Alternate gene names: NA
Gene position: 4135874-4137286 (Clockwise)
Preceding gene: 121639633
Following gene: 121639636
Centisome position: 94.54
GC content: 62.0
Gene sequence:
>1413_bases ATGCAGGGGCAGTTGTCGAGGACTAGGGTATATGCGGTGCCTGTCCCTGGATCTGCACAGTCGGCTTACGCCTGCGGCGT CGAGCGGTTGCTGGCGAGCTATCGATCCATCCCCGCGACTGCATCCATCCGGCTTGCCAAGCCCACCTCAAATCTGTTCC GCGCCCGCGTCAAACACGATGCACGCGGCCTGGACGCATCGGGACTGACCGGTGTCATCGGTATCGATCCCGAGGCCCGC ACCGCCGACGTGGCCGGCATGTGCACATACGAGGACCTAATCGCCGCGACACTGCACTACGGTCTGTCACCATTGGTGGT TCCGCAGCTGAGGACGATCACATTGGGCGGAGCGGTCACCGGCTTGGGTATCGAGTCGGCGTCGTTCCGCAACGGCCTGC CCCACGAGTCGGTGCTGGAGATGGATATCCTCACCGGCGCAGGAGAACTTCTCACCGTCTCGCCCGGACAGCACTCCGAC TTGTACCGTGCATTCCCTAACTCGTATGGGACACTGGGCTATTCAACCCGGCTTCGAATCCAGCTGGAGCCGGTCCGGCC GTTTGTCGCGCTGCGGCACATCCGATTTAGCTCGTTGACGGCGATGGTGGCCGCAATGGAGCGCATCATCGACACCGGCG GACTGGACGGCGAATCGGTGGACTATCTCGACGGGGTGGTTTTCAGCGCTGACGAAAGCTACCTGTGCATCGGCATGCAG ACGAGCGTACCGGGCCCGGTCAGCGACTACACCGGACAAGACATCTACTACCGGTCGATCCAACACGAGGCGGGGATCAA GGAAGACCGGTTGACCATCCACGATTACTTCTGGCGCTGGGACACCGATTGGTTCTGGTGCTCACGATCGTTTGGTGCCC AAAACCCGCGGCTGCGCCGCTGGTGGCCGCGGCGCTACCGGCGTAGCAGTGTCTACTGGAGGTTGATGGCGCTCGATCAG CGCTTCGGGATCGCCGACCGGTTCGAGAACAGCAGGGGTCGTCCCGCGCGTGAACGGGTGGTGCAGGATATCGAAGTGCC GATCGAACGGACCTGCGAGTTTCTGGAGTGGTTCGGGGAAAACGTGCCCATTTCGCCAATCTGGTTGTGCCCGTTGCGGC TACGCGATCACGCCGGCTGGCCGCTGTACCCGATCCGGCCTGACCGTAGCTATGTCAACATCGGGTTCTGGTCGTCGGTG CCGGTTGGCGCCACCGAGGGCGCCACCAACCGCAAGATCGAGAACAAGGTGAGTGCGCTCGACGGGCACAAGTCGCTCTA CTCCGACTCCTTCTATACCCGCGAGGAGTTCGACGAGCTCTACGGCGGCGAGACTTACAACACTGTGAAGAAAGCCTACG ATCCCGATTCGCGTCTCCTCGATCTTTACGCAAAGGCGGTGCAACGACGATGA
Upstream 100 bases:
>100_bases GCCGTGGGCTCAGCATTGATCAAGATCGTGCTGGCTGCGCTCACCTGTCCCATCAGGGCCGGACTCCTTCGTTTGTGATT GCTGCACCGCCCGCACCCGG
Downstream 100 bases:
>100_bases CAACGGGCAGACTCAGCATGGCCGAGATCCTGGAGATCTTCACCGCGACCGGGCAACACCCGCTGAAGTTCACCGCGTAT GACGGCAGCACCGCGGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Linked Oxidase Domain Protein; FAD Linked Oxidase-Like Protein; Oxidoreductase; Dehydrogenase; FAD Linked Oxidase-Like; FAD/FMN-Dependent Dehydrogenase; FAD Linked Oxidase; FAD/FMN-Containing Dehydrogenase; Fad-Dependent Oxidoreductase
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MQGQLSRTRVYAVPVPGSAQSAYACGVERLLASYRSIPATASIRLAKPTSNLFRARVKHDARGLDASGLTGVIGIDPEAR TADVAGMCTYEDLIAATLHYGLSPLVVPQLRTITLGGAVTGLGIESASFRNGLPHESVLEMDILTGAGELLTVSPGQHSD LYRAFPNSYGTLGYSTRLRIQLEPVRPFVALRHIRFSSLTAMVAAMERIIDTGGLDGESVDYLDGVVFSADESYLCIGMQ TSVPGPVSDYTGQDIYYRSIQHEAGIKEDRLTIHDYFWRWDTDWFWCSRSFGAQNPRLRRWWPRRYRRSSVYWRLMALDQ RFGIADRFENSRGRPARERVVQDIEVPIERTCEFLEWFGENVPISPIWLCPLRLRDHAGWPLYPIRPDRSYVNIGFWSSV PVGATEGATNRKIENKVSALDGHKSLYSDSFYTREEFDELYGGETYNTVKKAYDPDSRLLDLYAKAVQRR
Sequences:
>Translated_470_residues MQGQLSRTRVYAVPVPGSAQSAYACGVERLLASYRSIPATASIRLAKPTSNLFRARVKHDARGLDASGLTGVIGIDPEAR TADVAGMCTYEDLIAATLHYGLSPLVVPQLRTITLGGAVTGLGIESASFRNGLPHESVLEMDILTGAGELLTVSPGQHSD LYRAFPNSYGTLGYSTRLRIQLEPVRPFVALRHIRFSSLTAMVAAMERIIDTGGLDGESVDYLDGVVFSADESYLCIGMQ TSVPGPVSDYTGQDIYYRSIQHEAGIKEDRLTIHDYFWRWDTDWFWCSRSFGAQNPRLRRWWPRRYRRSSVYWRLMALDQ RFGIADRFENSRGRPARERVVQDIEVPIERTCEFLEWFGENVPISPIWLCPLRLRDHAGWPLYPIRPDRSYVNIGFWSSV PVGATEGATNRKIENKVSALDGHKSLYSDSFYTREEFDELYGGETYNTVKKAYDPDSRLLDLYAKAVQRR >Mature_470_residues MQGQLSRTRVYAVPVPGSAQSAYACGVERLLASYRSIPATASIRLAKPTSNLFRARVKHDARGLDASGLTGVIGIDPEAR TADVAGMCTYEDLIAATLHYGLSPLVVPQLRTITLGGAVTGLGIESASFRNGLPHESVLEMDILTGAGELLTVSPGQHSD LYRAFPNSYGTLGYSTRLRIQLEPVRPFVALRHIRFSSLTAMVAAMERIIDTGGLDGESVDYLDGVVFSADESYLCIGMQ TSVPGPVSDYTGQDIYYRSIQHEAGIKEDRLTIHDYFWRWDTDWFWCSRSFGAQNPRLRRWWPRRYRRSSVYWRLMALDQ RFGIADRFENSRGRPARERVVQDIEVPIERTCEFLEWFGENVPISPIWLCPLRLRDHAGWPLYPIRPDRSYVNIGFWSSV PVGATEGATNRKIENKVSALDGHKSLYSDSFYTREEFDELYGGETYNTVKKAYDPDSRLLDLYAKAVQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13375618, Length=415, Percent_Identity=26.0240963855422, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17568041, Length=431, Percent_Identity=22.969837587007, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17570305, Length=429, Percent_Identity=23.7762237762238, Blast_Score=104, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52977; Mature: 52977
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGQLSRTRVYAVPVPGSAQSAYACGVERLLASYRSIPATASIRLAKPTSNLFRARVKHD CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH ARGLDASGLTGVIGIDPEARTADVAGMCTYEDLIAATLHYGLSPLVVPQLRTITLGGAVT CCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEEECCCEE GLGIESASFRNGLPHESVLEMDILTGAGELLTVSPGQHSDLYRAFPNSYGTLGYSTRLRI ECCCCCCHHHCCCCCHHHEEEHHCCCCCCEEEECCCCCCHHHHHCCCCCCCCCEEEEEEE QLEPVRPFVALRHIRFSSLTAMVAAMERIIDTGGLDGESVDYLDGVVFSADESYLCIGMQ EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCCEEEEEEE TSVPGPVSDYTGQDIYYRSIQHEAGIKEDRLTIHDYFWRWDTDWFWCSRSFGAQNPRLRR CCCCCCCCCCCCCCEEEEHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCHHH WWPRRYRRSSVYWRLMALDQRFGIADRFENSRGRPARERVVQDIEVPIERTCEFLEWFGE HHHHHHHCCCCEEEEEEHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC NVPISPIWLCPLRLRDHAGWPLYPIRPDRSYVNIGFWSSVPVGATEGATNRKIENKVSAL CCCCCEEEEECEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH DGHKSLYSDSFYTREEFDELYGGETYNTVKKAYDPDSRLLDLYAKAVQRR CCHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MQGQLSRTRVYAVPVPGSAQSAYACGVERLLASYRSIPATASIRLAKPTSNLFRARVKHD CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH ARGLDASGLTGVIGIDPEARTADVAGMCTYEDLIAATLHYGLSPLVVPQLRTITLGGAVT CCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEEECCCEE GLGIESASFRNGLPHESVLEMDILTGAGELLTVSPGQHSDLYRAFPNSYGTLGYSTRLRI ECCCCCCHHHCCCCCHHHEEEHHCCCCCCEEEECCCCCCHHHHHCCCCCCCCCEEEEEEE QLEPVRPFVALRHIRFSSLTAMVAAMERIIDTGGLDGESVDYLDGVVFSADESYLCIGMQ EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCCEEEEEEE TSVPGPVSDYTGQDIYYRSIQHEAGIKEDRLTIHDYFWRWDTDWFWCSRSFGAQNPRLRR CCCCCCCCCCCCCCEEEEHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCHHH WWPRRYRRSSVYWRLMALDQRFGIADRFENSRGRPARERVVQDIEVPIERTCEFLEWFGE HHHHHHHCCCCEEEEEEHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC NVPISPIWLCPLRLRDHAGWPLYPIRPDRSYVNIGFWSSVPVGATEGATNRKIENKVSAL CCCCCEEEEECEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH DGHKSLYSDSFYTREEFDELYGGETYNTVKKAYDPDSRLLDLYAKAVQRR CCHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA