Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639628
Identifier: 121639628
GI number: 121639628
Start: 4130549
End: 4131790
Strand: Direct
Name: 121639628
Synonym: BCG_3772
Alternate gene names: NA
Gene position: 4130549-4131790 (Clockwise)
Preceding gene: 121639626
Following gene: 121639629
Centisome position: 94.42
GC content: 70.45
Gene sequence:
>1242_bases GTGGTAACCACCCGGGCACGCCTGGCCCTAGCCGCCGGCGCGGGCGCACGCTGGGCGTCGCGGGTCACCGGTCGCGGCGC CGGAGCGATGATCGGCGGTCTGGTCGCCATGACCCTGGACCGCTCGATCCTGCGCCAACTCGGGATGGGCCGGCGCACCG TCGTCGTCACCGGCACCAACGGCAAGTCGACCACCACACGGATGACCGCGGCCGCGCTGGGCACGTTGGGAGCCGTGGCC ACCAACGCCGAGGGCGCCAACATGGACGCCGGCCTGGTGGCCGCGCTCGCCGCTCACCGCGACGCCGAGCTGGCGGTGCT GGAAGTCGACGAGATGCACGTACCGCACATCTCCGATGCCGTCGATCCCGCCGTCGTCGTCTTGCTCAACCTCTCCCGAG ACCAGCTGGACCGGGTCGGCGAGATCAACGTCATCGAACGCACACTGCGGGCCGGGCTGGCCCGGCACCCCGACGCTGTC GTGGTCGCCAACTGCGACGACGTGCTGATGACCTCGGCCGCCTACGACAGCCCCAACGTCGTTTGGGTGGCTGCCGGCGG CGCGTGGTCAAACGATTCGGTCAGCTGCCCGCGCAGCAGCGAGGTCATCGTTCGCAAGGCCCCCTCTCAGGAAGACCACT GGTACTCCACCGGCGCCGACTTCAAGCGGCCCGCCCCGCACTGGTGGTTCGACGACGCCACGCTGTATGGGCCCGACGGG CTGGCGCTGCCGATGCGGCTGGCACTGCCAGGCTCGGTGAATCGCGGCAACGCCGCCCAAGCCGTGGCCGCCGCAGTCGC CCTCGGCGCCGATCCGGCTGTGGCCGTCGCCGCCGTCTGCCAGGTCGACGAGGTCGCCGGACGCTACCGGACCGTTCGTA TCGGCGCGCACCAAGCCCGGATCCTGCTGGCCAAAAACCCGGCCGGCTGGCAGGAAGCGCTGGCGATGGTCGACAAGCAT GCAGACGGGGTGGTCATCGCGGTCAACGGGCGGGTTCCTGACGGCGAGGACCTGTCCTGGTTGTGGGACGTGCGCTTCGA GCACTTCGAGACGACCCGAGTGGTAGCCGCTGGGGAGCGCGGCACCGATTTGGCGGTTCGCCTCGGATATGCAGGCGTCG AGCACACCCTGGTGCACGACACCGTGGCCGCCATCGCCTCATGCCCACCCGGGCGGGTGGAGGTCGTCGCCAACTACACC GCGTTCCTGCAGCTGCAACGAGCATTGGCGCGTCGTGGCTGA
Upstream 100 bases:
>100_bases TGGTCGCTACGCATCGTGTCGGCCCGTAAAACCCGGACGCGGGCGACCCGCCGCACCCGGCGACAAGCGCCGAGCTTGCG ATCGCCCGTAAACTGCCCGG
Downstream 100 bases:
>100_bases TTCTGTGGTGCGGATCGGGCTCGTGCTGCCCGACGTGATGGGCACCTACGGCGACGGCGGCAACGCCGTGGTGCTACGAC AGCGGCTGCTGCTGCGCGGC
Product: putative ligase
Products: NA
Alternate protein names: Mur Ligase Family Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase; Ligase; Mur Ligase; UDP-N-Acetylmuramoylalanine-D-Glutamate Ligase; UDP-N-Acetylmuramyl Tripeptide Synthase-Like Protein; Murein Ligase; UDP-N-Acetylmuramoyl-L-Alanyl-D-Glutamate-Lysine Ligase; Udp-N-Acetylmuramyl Tripeptide Synthetase; Mur Ligase Middle Domain Protein; UDP-N-Acetylmuramyl Peptide Synthetase
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVA TNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAV VVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSSEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKH ADGVVIAVNGRVPDGEDLSWLWDVRFEHFETTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYT AFLQLQRALARRG
Sequences:
>Translated_413_residues MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVA TNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAV VVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSSEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKH ADGVVIAVNGRVPDGEDLSWLWDVRFEHFETTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYT AFLQLQRALARRG >Mature_413_residues MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVA TNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAV VVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSSEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKH ADGVVIAVNGRVPDGEDLSWLWDVRFEHFETTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYT AFLQLQRALARRG
Specific function: Unknown
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43425; Mature: 43425
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN CCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA CCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV CCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHEECCCCCCCCE VWVAAGGAWSNDSVSCPRSSEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG EEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEECCEEE ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFETTRVVAAGER EEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEHHHCCEEEEEEECCC GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN CCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA CCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV CCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHEECCCCCCCCE VWVAAGGAWSNDSVSCPRSSEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG EEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEECCEEE ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFETTRVVAAGER EEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEHHHCCEEEEEEECCC GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA