Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639603
Identifier: 121639603
GI number: 121639603
Start: 4103470
End: 4104825
Strand: Direct
Name: 121639603
Synonym: BCG_3748
Alternate gene names: NA
Gene position: 4103470-4104825 (Clockwise)
Preceding gene: 121639598
Following gene: 121639604
Centisome position: 93.8
GC content: 67.26
Gene sequence:
>1356_bases TTGCACAAACGCTACGCGCCGCAACGCCCGAAACCCGACACTGAGACCTACATTGAGAAATGCACCGACCGCCGACAGGA TGGAGGCCATGACGAACGACGACAGCTGCTGCGTCCGGTGAGCATGCTGCCGCCTGGCTACCCGGTTGAACCACCGCCCG TGGCGCCGGGATATGCGCCGGCCGGATATCCGCCCTACCCCGCTACACCACCCGGGTACGGCCCGCCGGGTTATGGTGCG CCGCCCAGCTATGGCCCCCCGCCTGGCTATGGTCCACCCCTCGGCTACCCCGCCGCACCGCCCGGCTGCGGCCCACCGCC CGGCTATGGCCCACCGCTCGGCTATGGCCCACCGCTCGCCCCGGGCGCGGTCAAACCAGGAATAATCCCGCTGCGGCCGT TGACCTTGAGCGATATCTTCAACGGCGCGGTCGGCTACATCCGCGCTAACCCGAAGGCGACGCTGGGATTGACCGCCATG GTCGTGGTGACCCTGCAAATCATCTCACTGGTGGCCCTATTTGGCCCCATGACCGCCTTCGGTGACATCGTGACCGGGGA GCCCGACGAGCTGACCGGCGCGGTGGTGGGCGGTTGGTCAGCGTCATTCGGCGCCAGTCTCCTGGTCAGCTGGCTAGCGG GTGTGCTGCTCAGCGGCATGCTCACCGTCATCGTCGGGCGGGCCGTGTTCGGTTCGCCGATCACCGTCGGCGAGGCGTGG GCCAAGGTTCGCGGTCGCCTGCTCGCGTTGTTCGGCCTGGCACTGCTGGAAGCAGCCGGCGTGGTGGCGGTGCTCGGGCT GGCGGTCGTCATACTTTCCGGGGTCGCGGCGGCGGCCAACGAGGCAGCGGCGGCCCTCCTCGGCTTCCCGCTGCTGCTCG TGGTTGGGGTGTCGCTGGCCTATTTGTATGTCGTCCTGCTGTTCGCACCCGTGCTGATCGTGCTGGAGAGGCTGCCCATC GTCGAGGCGATCACCAGATCCTTTGCGCTCGTGCGTCATGGCTTCTGGCGGGTCCTGGGCATCCGCCTGCTGACGGTGCT GGTGGTGGGCGTAGTTGGTAATGCGATCGCGGCTCCTTTCATGATCGTCGGCGAGATAGTGACGGCCGTCACAGCGTCCG ACGGGTCAGTCACCATGCGGCTCGTCGGCGCTACGCTCTCGGCCATCGGAGTGACGATCGGCCAGATTGTCACCGCGCCG TTCAGCGCCGGAGTTGTCGTGCTGTTATACACCGACCGCCGTATCCGTGCCGAGGCCTTCGACCTGGTATTGCAGACCGG CTTAGAAGCCGGCCCCGCCGGCGGGCCCGCCCCGGTGGAGTCCACCGACAACCTATGGCTCACGCGGCCTTTCTAA
Upstream 100 bases:
>100_bases ATCGCGGCCAGCAGCATGCGTATGGTCGCGGTCCGCAGCTTGTCCTGCGTCTTCATCGCTTGGGTCAGGTCTGACCGAAG CTGGGATTTAAGTTCCGCCA
Downstream 100 bases:
>100_bases AGGGAGTTAGTGAGGACAGGCTGACAGTGCCCTCCATCGACATCGACCGCGAAGCCGCACACCAAGCCGCACAACGCGAG CTCGACAAACCGATCTACCC
Product: putative transmembrane protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGA PPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPLAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAM VVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPI VEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAP FSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sequences:
>Translated_451_residues MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGA PPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPLAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAM VVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPI VEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAP FSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF >Mature_451_residues MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGA PPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPLAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAM VVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPI VEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAP FSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46452; Mature: 46452
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF CCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW CCCCCCCCCHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF HHHHHHCCCCCCCCCCCCCCCCCCEEEECCC >Mature Secondary Structure MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF CCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW CCCCCCCCCHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF HHHHHHCCCCCCCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA