Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121639543
Identifier: 121639543
GI number: 121639543
Start: 4042196
End: 4043491
Strand: Direct
Name: 121639543
Synonym: BCG_3688
Alternate gene names: NA
Gene position: 4042196-4043491 (Clockwise)
Preceding gene: 121639541
Following gene: 121639544
Centisome position: 92.4
GC content: 67.44
Gene sequence:
>1296_bases TTGGCCGTTGGCGCCGCCGCGGTGACCGAAGTCGGCGATACGGCATCTCCTGTTGGCTCCTCGGGCGCCTCTGGCGGAGC TATCGCAAGCGGCAGCGTAGCCCGGGTCGGCACGGCGACCGCGGTTACCGCGCTGTGCGGCTACGCGGTGATTTATCTGG CGGCCCGCAACCTGGCTCCCAACGGCTTCTCGGTATTCGGGGTGTTCTGGGGCGCATTCGGACTGGTCACCGGGGCCGCC AACGGCCTGCTGCAAGAAACCACCCGCGAGGTCCGCTCGCTGGGGTACTTGGACGTCTCTGCAGACGGCCGCCGTACCCA TCCGCTGCGGGTCTCCGGGATGGTCGGCCTCGGCTCGTTGGTCGTGATCGCCGGTAGCTCACCGTTGTGGAGCGGGCGGG TATTCGCCGAGGCGCGCTGGCTATCGGTCGCATTGCTCAGCATCGGGCTGGCTGGGTTTTGCCTACACGCCACCCTGCTG GGCATGCTGGCCGGCACCAACCGGTGGACCCAGTACGGCGCGCTGATGGTGGCCGACGCGGTCATCCGGGTGGTGGTCGC CGCGGCCACGTTCGTGATCGGATGGCAGCTGGTCGGGTTCATCTGGGCAACCGTGGCGGGTTCGGTTGCCTGGCTGATCA TGTTGATGACCTCACCCCCGACACGCGCGGCCGCCCGCTTGATGACGCCCGGCGCTACTGCGACATTCCTGAGGGGCGCC GCCCATTCGATCATCGCGGCCGGTGCCAGCGCGATATTGGTGATGGGGTTTCCGGTCTTGCTGAAGCTAACCTCCAATGA ACTGGGCGCGCAGGGAGGCGTTGTCATCCTTGCGGTGACGTTAACCCGGGCGCCACTGCTGGTGCCACTGACCGCCATGC AAGGCAACCTCATCGCGCATTTCGTCGATGAACGCACCGAGCGGATTCGGGCGCTAATCGCGCCGGCGGCGCTCATCGGC GGCGTTGGCGCAGTCGGGATGCTGGCGGCCGGCGTCGTAGGTCCATGGATTATGCGCGTCGCGTTCGGGTCGGAATACCA GTCCAGCAGCGCATTGCTGGCCTGGTTGACGGCGGCCGCGGTGGCGATCGCAATGCTGACACTCACCGGTGCCGCCGCGG TCGCGGCCGCACTGCACCGGGCGTATTCGCTGGGCTGGGTTGGTGCGACGGTTGGGTCGGGCTTGTTGCTGCTGCTGCCG CTGTCCTTGGAGACCCGCACCGTGGTCGCGTTGTTATGCGGTCCGCTGGTGGGAATCGGCGTCCATTTGGTGGCGCTGGC GCGGACGGACGAGTAA
Upstream 100 bases:
>100_bases CCCACAATAGCGACGAACCGACATCAATTGGTCAGGCTCGCGCCGCGCAGCGCGGCCAACCGGCCCGCCTACTATTTTCA GTCGTGACGATCCATGTCGG
Downstream 100 bases:
>100_bases GCGGCCGATCAGCCCCTGACCAACGTGTAACTTGTGGGCTTAAATGGCCTCGAAAATGGACACTGAAACGCACTACTCGG ACGTCTGGGTCGTCATTCCC
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MAVGAAAVTEVGDTASPVGSSGASGGAIASGSVARVGTATAVTALCGYAVIYLAARNLAPNGFSVFGVFWGAFGLVTGAA NGLLQETTREVRSLGYLDVSADGRRTHPLRVSGMVGLGSLVVIAGSSPLWSGRVFAEARWLSVALLSIGLAGFCLHATLL GMLAGTNRWTQYGALMVADAVIRVVVAAATFVIGWQLVGFIWATVAGSVAWLIMLMTSPPTRAAARLMTPGATATFLRGA AHSIIAAGASAILVMGFPVLLKLTSNELGAQGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDERTERIRALIAPAALIG GVGAVGMLAAGVVGPWIMRVAFGSEYQSSSALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYSLGWVGATVGSGLLLLLP LSLETRTVVALLCGPLVGIGVHLVALARTDE
Sequences:
>Translated_431_residues MAVGAAAVTEVGDTASPVGSSGASGGAIASGSVARVGTATAVTALCGYAVIYLAARNLAPNGFSVFGVFWGAFGLVTGAA NGLLQETTREVRSLGYLDVSADGRRTHPLRVSGMVGLGSLVVIAGSSPLWSGRVFAEARWLSVALLSIGLAGFCLHATLL GMLAGTNRWTQYGALMVADAVIRVVVAAATFVIGWQLVGFIWATVAGSVAWLIMLMTSPPTRAAARLMTPGATATFLRGA AHSIIAAGASAILVMGFPVLLKLTSNELGAQGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDERTERIRALIAPAALIG GVGAVGMLAAGVVGPWIMRVAFGSEYQSSSALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYSLGWVGATVGSGLLLLLP LSLETRTVVALLCGPLVGIGVHLVALARTDE >Mature_430_residues AVGAAAVTEVGDTASPVGSSGASGGAIASGSVARVGTATAVTALCGYAVIYLAARNLAPNGFSVFGVFWGAFGLVTGAAN GLLQETTREVRSLGYLDVSADGRRTHPLRVSGMVGLGSLVVIAGSSPLWSGRVFAEARWLSVALLSIGLAGFCLHATLLG MLAGTNRWTQYGALMVADAVIRVVVAAATFVIGWQLVGFIWATVAGSVAWLIMLMTSPPTRAAARLMTPGATATFLRGAA HSIIAAGASAILVMGFPVLLKLTSNELGAQGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDERTERIRALIAPAALIGG VGAVGMLAAGVVGPWIMRVAFGSEYQSSSALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYSLGWVGATVGSGLLLLLPL SLETRTVVALLCGPLVGIGVHLVALARTDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1510 and M.bovis Mb3654 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43516; Mature: 43385
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGAAAVTEVGDTASPVGSSGASGGAIASGSVARVGTATAVTALCGYAVIYLAARNLAP CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC NGFSVFGVFWGAFGLVTGAANGLLQETTREVRSLGYLDVSADGRRTHPLRVSGMVGLGSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCEE VVIAGSSPLWSGRVFAEARWLSVALLSIGLAGFCLHATLLGMLAGTNRWTQYGALMVADA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VIRVVVAAATFVIGWQLVGFIWATVAGSVAWLIMLMTSPPTRAAARLMTPGATATFLRGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHH AHSIIAAGASAILVMGFPVLLKLTSNELGAQGGVVILAVTLTRAPLLVPLTAMQGNLIAH HHHHHHHCHHHHHHHCCHHHEEECCCCCCCCCCEEEEEEECCCCCCEEEEHHHCCCHHHH FVDERTERIRALIAPAALIGGVGAVGMLAAGVVGPWIMRVAFGSEYQSSSALLAWLTAAA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VAIAMLTLTGAAAVAAALHRAYSLGWVGATVGSGLLLLLPLSLETRTVVALLCGPLVGIG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH VHLVALARTDE HHHEEEEECCC >Mature Secondary Structure AVGAAAVTEVGDTASPVGSSGASGGAIASGSVARVGTATAVTALCGYAVIYLAARNLAP CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC NGFSVFGVFWGAFGLVTGAANGLLQETTREVRSLGYLDVSADGRRTHPLRVSGMVGLGSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCEE VVIAGSSPLWSGRVFAEARWLSVALLSIGLAGFCLHATLLGMLAGTNRWTQYGALMVADA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VIRVVVAAATFVIGWQLVGFIWATVAGSVAWLIMLMTSPPTRAAARLMTPGATATFLRGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHH AHSIIAAGASAILVMGFPVLLKLTSNELGAQGGVVILAVTLTRAPLLVPLTAMQGNLIAH HHHHHHHCHHHHHHHCCHHHEEECCCCCCCCCCEEEEEEECCCCCCEEEEHHHCCCHHHH FVDERTERIRALIAPAALIGGVGAVGMLAAGVVGPWIMRVAFGSEYQSSSALLAWLTAAA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VAIAMLTLTGAAAVAAALHRAYSLGWVGATVGSGLLLLLPLSLETRTVVALLCGPLVGIG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH VHLVALARTDE HHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]