Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121639544
Identifier: 121639544
GI number: 121639544
Start: 4043535
End: 4044260
Strand: Direct
Name: 121639544
Synonym: BCG_3689
Alternate gene names: NA
Gene position: 4043535-4044260 (Clockwise)
Preceding gene: 121639543
Following gene: 121639545
Centisome position: 92.43
GC content: 63.09
Gene sequence:
>726_bases ATGGCCTCGAAAATGGACACTGAAACGCACTACTCGGACGTCTGGGTCGTCATTCCCGCCTTCAACGAAGCCGCCGTGAT CGGCAAGGTCGTCACCGATGTGCGGTCAGTCTTCGACCACGTCGTCTGCGTGGACGACGGCAGCACCGACGGCACCGGCG ACATCGCCCGGCGGTCCGGTGCTCACCTCGTACGCCATCCGATCAACCTGGGCCAGGGGGCGGCCATTCAGACCGGAATC GAGTACGCCCGCAAGCAGCCGGGCGCCCAGGTCTTTGCCACCTTTGACGGCGACGGCCAGCACCGCGTCAAAGACGTGGC CGCAATGGTCGACCGGCTCGGCGCAGGTGACGTCGATGTGGTGATCGGAACGCGGTTCGGCCGGCCCGTGGGCAAAGCTT CGGCCAGCCGACCGCCACTGATGAAGCGGATCGTGCTGCAGACAGGAGCGCGGTTGAGCCGTCGAGGCCGCCGACTTGGC TTGACCGACACCAACAATGGCCTGAGGGTGTTCAACAAGACCGTGGCCGACGGGCTGAACATCACCATGAGCGGCATGAG CCACGCCACCGAGTTCATCATGTTGATCGCCGAAAACCATTGGCGGGTAGCGGAAGAACCGGTCGAGGTGCTCTACACCG AGTATTCGAAGTCGAAAGGCCAACCGCTGCTCAACGGCGTCAACATCATTTTCGACGGGTTTCTGCGAGGGAGGATGCCA CGATGA
Upstream 100 bases:
>100_bases GGTCCGCTGGTGGGAATCGGCGTCCATTTGGTGGCGCTGGCGCGGACGGACGAGTAAGCGGCCGATCAGCCCCTGACCAA CGTGTAACTTGTGGGCTTAA
Downstream 100 bases:
>100_bases ACTGGATCCAGGTGCTGTTGATCGCGTCGATCATCGGGTTGCTGTTCTACCTGTTGCGGTCGCGCCGAAGCGCGCGGTCG CGTGCCTGGGTCAAGGTGGG
Product: transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MASKMDTETHYSDVWVVIPAFNEAAVIGKVVTDVRSVFDHVVCVDDGSTDGTGDIARRSGAHLVRHPINLGQGAAIQTGI EYARKQPGAQVFATFDGDGQHRVKDVAAMVDRLGAGDVDVVIGTRFGRPVGKASASRPPLMKRIVLQTGARLSRRGRRLG LTDTNNGLRVFNKTVADGLNITMSGMSHATEFIMLIAENHWRVAEEPVEVLYTEYSKSKGQPLLNGVNIIFDGFLRGRMP R
Sequences:
>Translated_241_residues MASKMDTETHYSDVWVVIPAFNEAAVIGKVVTDVRSVFDHVVCVDDGSTDGTGDIARRSGAHLVRHPINLGQGAAIQTGI EYARKQPGAQVFATFDGDGQHRVKDVAAMVDRLGAGDVDVVIGTRFGRPVGKASASRPPLMKRIVLQTGARLSRRGRRLG LTDTNNGLRVFNKTVADGLNITMSGMSHATEFIMLIAENHWRVAEEPVEVLYTEYSKSKGQPLLNGVNIIFDGFLRGRMP R >Mature_240_residues ASKMDTETHYSDVWVVIPAFNEAAVIGKVVTDVRSVFDHVVCVDDGSTDGTGDIARRSGAHLVRHPINLGQGAAIQTGIE YARKQPGAQVFATFDGDGQHRVKDVAAMVDRLGAGDVDVVIGTRFGRPVGKASASRPPLMKRIVLQTGARLSRRGRRLGL TDTNNGLRVFNKTVADGLNITMSGMSHATEFIMLIAENHWRVAEEPVEVLYTEYSKSKGQPLLNGVNIIFDGFLRGRMPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 26213; Mature: 26082
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKMDTETHYSDVWVVIPAFNEAAVIGKVVTDVRSVFDHVVCVDDGSTDGTGDIARRSG CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHCC AHLVRHPINLGQGAAIQTGIEYARKQPGAQVFATFDGDGQHRVKDVAAMVDRLGAGDVDV CCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEE VIGTRFGRPVGKASASRPPLMKRIVLQTGARLSRRGRRLGLTDTNNGLRVFNKTVADGLN EEECCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHCCCEECCCCCCCCHHHHHHHHHCCCC ITMSGMSHATEFIMLIAENHWRVAEEPVEVLYTEYSKSKGQPLLNGVNIIFDGFLRGRMP EEECCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC R C >Mature Secondary Structure ASKMDTETHYSDVWVVIPAFNEAAVIGKVVTDVRSVFDHVVCVDDGSTDGTGDIARRSG CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHCC AHLVRHPINLGQGAAIQTGIEYARKQPGAQVFATFDGDGQHRVKDVAAMVDRLGAGDVDV CCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEE VIGTRFGRPVGKASASRPPLMKRIVLQTGARLSRRGRRLGLTDTNNGLRVFNKTVADGLN EEECCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHCCCEECCCCCCCCHHHHHHHHHCCCC ITMSGMSHATEFIMLIAENHWRVAEEPVEVLYTEYSKSKGQPLLNGVNIIFDGFLRGRMP EEECCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]