Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639387
Identifier: 121639387
GI number: 121639387
Start: 3865531
End: 3866484
Strand: Direct
Name: 121639387
Synonym: BCG_3532
Alternate gene names: NA
Gene position: 3865531-3866484 (Clockwise)
Preceding gene: 121639386
Following gene: 121639392
Centisome position: 88.36
GC content: 67.61
Gene sequence:
>954_bases GTGTCCACCCGCCAGGCCGCCGAAGCCGACCTGGCCGGCAAAGCCGCTCAATATCGTCCCGACGAGCTGGCCCGCTACGC CCAGCGGGTCATGGACTGGCTACACCCCGACGGCGACCTCACCGACACCGAACGCGCCCGCAAACGCGGCATCACCCTGA GCAACCAGCAATACGACGGCATGTCACGGCTAAGTGGCTACCTGACCCCCCAAGCGCGGGCCACCTTTGAAGCCGTGCTA GCCAAACTGGCCGCCCCCGGCGCGACCAACCCCGACGACCACACCCCGGTCATCGACACCACCCCCGATGCGGCCGCCAT CGACCGCGACACCCGCAGCCAAGCCCAACGCAACCACGACGGGCTGCTGGCCGGGCTGCGCGCGCTGATCGCCTCCGGGG AACTGGGCCAACACAACGGTCTTCCCGTCTCGATCGTGGTCACCACCACCCTGACCGACCTGCAAACCGGCGCCGGCAAG GGCTTCACCGGCGGCGGCACCCTGCTACCCATGGCCGATGTGATCCGCATGACCAGCCACGCCCACCACTACTCCCCCGC AAGCGGGAGGTACCCCCAGGCGATCTTCGACCACGGCACACCCCTGGCGCTGTATCACACCAAACGCCTAGCCTCCCCGG CCCAGCGGATCATGCTGTTCGCCAACGACCGCGGCTGCACCAAACCCGGCTGTGACGCACCGGCCTACCACAGCCAAGCC CACCACGTCACCGGCTGGACCAGCACCGGACGCACCGACATCACCGAGCTGACCCTGGCCTGCGACCCCGACAACCGACT CGCCGAAAAAGGCTGGACCACCCGCAAAAACACCCACGGCCACACCGAATGGCTACCACCACCCCACCTCGACCACGGCC AACCCCGCACCAACACCTTCCACCACCCCGAACGATTCCTCCACAACCAAGACGACGACGACGAACCCGATTGA
Upstream 100 bases:
>100_bases TTGACCGCCACCGCCACCGCCCAACGCCAGGGCCTGATCGGCGAGGCGCACATCAAAGTGATTCGCGCCCTTTTTCGCCC ACCTGCCCGCCGCGGTGGAT
Downstream 100 bases:
>100_bases CCCCCAGCAGTCAAAGCCACACGCCACAACGCCGCACAACCATAAACACCGAGTCCGTCAGGGCCTGGCCGGAGCAAACA CGCCACGGTGGTAGGAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSTRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDGMSRLSGYLTPQARATFEAVL AKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGK GFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQA HHVTGWTSTGRTDITELTLACDPDNRLAEKGWTTRKNTHGHTEWLPPPHLDHGQPRTNTFHHPERFLHNQDDDDEPD
Sequences:
>Translated_317_residues MSTRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDGMSRLSGYLTPQARATFEAVL AKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGK GFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQA HHVTGWTSTGRTDITELTLACDPDNRLAEKGWTTRKNTHGHTEWLPPPHLDHGQPRTNTFHHPERFLHNQDDDDEPD >Mature_316_residues STRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDGMSRLSGYLTPQARATFEAVLA KLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGKG FTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQAH HVTGWTSTGRTDITELTLACDPDNRLAEKGWTTRKNTHGHTEWLPPPHLDHGQPRTNTFHHPERFLHNQDDDDEPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 34647; Mature: 34515
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDG CCCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC MSRLSGYLTPQARATFEAVLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHD HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHCCHHHHHHHHCHH GLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGKGFTGGGTLLPMADVIRMTSH HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH AHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQA HCCCCCCCCCCCHHHHCCCCCEEEEHHHHHHCHHHEEEEEECCCCCCCCCCCCCCCCCCC HHVTGWTSTGRTDITELTLACDPDNRLAEKGWTTRKNTHGHTEWLPPPHLDHGQPRTNTF CEECCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HHPERFLHNQDDDDEPD CCHHHHHCCCCCCCCCC >Mature Secondary Structure STRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDG CCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC MSRLSGYLTPQARATFEAVLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHD HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHCCHHHHHHHHCHH GLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGKGFTGGGTLLPMADVIRMTSH HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH AHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQA HCCCCCCCCCCCHHHHCCCCCEEEEHHHHHHCHHHEEEEEECCCCCCCCCCCCCCCCCCC HHVTGWTSTGRTDITELTLACDPDNRLAEKGWTTRKNTHGHTEWLPPPHLDHGQPRTNTF CEECCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HHPERFLHNQDDDDEPD CCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]