Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639386
Identifier: 121639386
GI number: 121639386
Start: 3865092
End: 3865760
Strand: Direct
Name: 121639386
Synonym: BCG_3531
Alternate gene names: NA
Gene position: 3865092-3865760 (Clockwise)
Preceding gene: 121639385
Following gene: 121639387
Centisome position: 88.35
GC content: 66.22
Gene sequence:
>669_bases ATGGGTTCGGGTAGCCGCGAACGGATTGTCGAGGTCTTTGATGCGCTGGATGCCGAGCTGGACCGCTTGGACGAGGTGTC TTTTGAGGTGTTGACCACCCCGGAACGGCTGCGGTCTCTGGAACGTCTGGAATGCTTGGTGCGCCGGCTACCGGCGGTCG GGCACACGTTGATCAACCAACTCGACACCCAAGCCAGCGAGGAAGAACTGGGCGGCACGCTGTGCTGCGCGCTGGCCAAC CGGTTACGCATCACCAAGCCCGACGCCGCCCTACGCATCGCCGACGCCGCCGATCTCGGACCTCGTCGAGCACTCACCGG CGAACCGCTAGCCCCACAGTTGACCGCCACCGCCACCGCCCAACGCCAGGGCCTGATCGGCGAGGCGCACATCAAAGTGA TTCGCGCCCTTTTTCGCCCACCTGCCCGCCGCGGTGGATGTGTCCACCCGCCAGGCCGCCGAAGCCGACCTGGCCGGCAA AGCCGCTCAATATCGTCCCGACGAGCTGGCCCGCTACGCCCAGCGGGTCATGGACTGGCTACACCCCGACGGCGACCTCA CCGACACCGAACGCGCCCGCAAACGCGGCATCACCCTGAGCAACCAGCAATACGACGGCATGTCACGGCTAAGTGGCTAC CTGACCCCCCAAGCGCGGGCCACCTTTGA
Upstream 100 bases:
>100_bases GAGATGCGCGGCACCTAGCTCGGTAATCCCTTGTGTTGCTTTAGCTTCAGCGGTCACAGCGCGGCGATTGTTGTCGGTGG CCCCTCGTAGAATTTGGGGT
Downstream 100 bases:
>100_bases AGCCGTGCTAGCCAAACTGGCCGCCCCCGGCGCGACCAACCCCGACGACCACACCCCGGTCATCGACACCACCCCCGATG CGGCCGCCATCGACCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MGSGSRERIVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALAN RLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQ SRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL
Sequences:
>Translated_222_residues MGSGSRERIVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALAN RLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQ SRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL >Mature_221_residues GSGSRERIVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALANR LRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQS RSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24521; Mature: 24390
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGSRERIVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH LDTQASEEELGGTLCCALANRLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATA HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCHHCCCCCCCCCCCCCCCCHHHHHHH QRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLA HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC TPRRRPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GSGSRERIVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH LDTQASEEELGGTLCCALANRLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATA HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCHHCCCCCCCCCCCCCCCCHHHHHHH QRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLA HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC TPRRRPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]