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The map label for this gene is yefM

Identifier: 121639284

GI number: 121639284

Start: 3758328

End: 3758603

Strand: Direct

Name: yefM

Synonym: BCG_3429

Alternate gene names: 121639284

Gene position: 3758328-3758603 (Clockwise)

Preceding gene: 121639281

Following gene: 121639285

Centisome position: 85.91

GC content: 63.41

Gene sequence:

>276_bases
ATGAGCATCAGTGCGAGCGAGGCGAGGCAGCGCCTGTTTCCACTCATCGAACAGGTCAATACCGATCACCAGCCGGTGCG
GATCACCTCCCGGGCCGGCGATGCGGTGCTGATGTCCGCCGACGACTACGACGCGTGGCAGGAAACGGTCTATCTGCTGC
GCTCACCGGAGAACGCCAGGCGGTTGATGGAAGCGGTTGCCCGGGATAAGGCTGGGCACTCGGCTTTCACCAAGTCTGTA
GATGAGCTGCGGGAGATGGCCGGCGGCGAGGAGTGA

Upstream 100 bases:

>100_bases
CCGCGGTGCCGATGGTGACGACCCGCTCACGCGCCCACCGTACGGACAACTTGTACCATTGTGGTACAGATTATCCGTAC
ATCTTTCTAAGAGAGGACGC

Downstream 100 bases:

>100_bases
GAAGCGTCAACTTCGATCCCGATGCCTGGGAGGACTTCTTGTTCTGGCTGGCCGCTGATCGCAAAACGGCCCGTCGGATC
ACCCGGTTGATCGGAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE

Sequences:

>Translated_91_residues
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE
>Mature_90_residues
SISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSVD
ELREMAGGEE

Specific function: Part of a toxin-antitoxin (TA) module. A probable antitoxin for the putative mRNA interferase YeoB

COG id: COG2161

COG function: function code D; Antitoxin of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YefM antitoxin family

Homologues:

Organism=Escherichia coli, GI87082026, Length=72, Percent_Identity=50, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEFM_MYCBO (P65068)

Other databases:

- EMBL:   BX248345
- RefSeq:   NP_857033.1
- ProteinModelPortal:   P65068
- SMR:   P65068
- EnsemblBacteria:   EBMYCT00000017353
- GeneID:   1093588
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb3392
- GeneTree:   EBGT00050000018538
- HOGENOM:   HBG665623
- OMA:   ETAYLMR
- ProtClustDB:   CLSK792441
- BioCyc:   MBOV233413:MB3392-MONOMER
- InterPro:   IPR006442
- TIGRFAMs:   TIGR01552

Pfam domain/function: PF02604 PhdYeFM

EC number: NA

Molecular weight: Translated: 10194; Mature: 10063

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR
CCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHCCCHHHH
RLMEAVARDKAGHSAFTKSVDELREMAGGEE
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR
CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHCCCHHHH
RLMEAVARDKAGHSAFTKSVDELREMAGGEE
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972