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The map label for this gene is sdhD

Identifier: 121639241

GI number: 121639241

Start: 3693008

End: 3693442

Strand: Direct

Name: sdhD

Synonym: BCG_3383

Alternate gene names: NA

Gene position: 3693008-3693442 (Clockwise)

Preceding gene: 121639240

Following gene: 121639242

Centisome position: 84.42

GC content: 59.31

Gene sequence:

>435_bases
ATGAGCGCCCCGGTCAGACAGCGCAGCCATGACCGTCCAGCCAGCCTGGACAACCCACGATCACCACGGCGGCGTGCCGG
CATGCCCAACTTCGAGAAATTCGCCTGGCTGTTCATGCGGTTTTCCGGTGTTGTGTTGGTGTTCCTGGCGATCGGGCACC
TGTTCATCATGCTGATGTGGGACAACGGCGTGTATCGCCTGGACTTCAACTTCGTTGCCCAACGCTGGGCGTCGCCGTTC
TGGCAGACCTGGGATCTGCTGTTGTTGTGGCTGGCGCAGCTGCACGGCGGCAACGGTCTGCGCACCATCATTGACGACTA
CAGCCGCAAAGACACCACCCGATTCTGGCTGAACTCGTTGCTGGTGTTGTCCATGCTGTTCACCCTGATGCTGGGAACCT
ACGTGATAGTGACATTCGACCCGAACATCTCCTGA

Upstream 100 bases:

>100_bases
GCTATCAGCGGCTGATGTTGTGGATCATCGGCAGCGTCTTCCTCTTGCTGATGGTTCCGGCAGGCGTGGTGGTGGGCATC
CACATGTGGGAGCACTTCCG

Downstream 100 bases:

>100_bases
AAGGCCCGGAAGGAGCACATGATCACGCCACCTCTCCCCCGCAAGCGGGCGGTACCCCCACCTCATCGCTGCGGCCCCCT
CGTCGCTTCGCGGCTGGGGG

Product: putative succinate dehydrogenase (hydrophobic membrane anchor subunit) sdhD

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Subunit D; Succinate Dehydrogenase Membrane Subunit; Succinate Dehydrogenase Cytochrome; Succinate Dehydrogenase; Succinate Dehydrogenase SdhD; Succinate Dehydrogenase Hydrophobic Anchor Subunit-Like; Succinate Dehydrogenase Cytochrome B Subunit; Succinate Dehydrogenase Hydrophobic Membrane Anchor Protei

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSAPVRQRSHDRPASLDNPRSPRRRAGMPNFEKFAWLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWASPF
WQTWDLLLLWLAQLHGGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLFTLMLGTYVIVTFDPNIS

Sequences:

>Translated_144_residues
MSAPVRQRSHDRPASLDNPRSPRRRAGMPNFEKFAWLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWASPF
WQTWDLLLLWLAQLHGGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLFTLMLGTYVIVTFDPNIS
>Mature_143_residues
SAPVRQRSHDRPASLDNPRSPRRRAGMPNFEKFAWLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWASPFW
QTWDLLLLWLAQLHGGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLFTLMLGTYVIVTFDPNIS

Specific function: Unknown

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 16901; Mature: 16770

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPVRQRSHDRPASLDNPRSPRRRAGMPNFEKFAWLFMRFSGVVLVFLAIGHLFIMLMW
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DNGVYRLDFNFVAQRWASPFWQTWDLLLLWLAQLHGGNGLRTIIDDYSRKDTTRFWLNSL
CCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
LVLSMLFTLMLGTYVIVTFDPNIS
HHHHHHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure 
SAPVRQRSHDRPASLDNPRSPRRRAGMPNFEKFAWLFMRFSGVVLVFLAIGHLFIMLMW
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DNGVYRLDFNFVAQRWASPFWQTWDLLLLWLAQLHGGNGLRTIIDDYSRKDTTRFWLNSL
CCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
LVLSMLFTLMLGTYVIVTFDPNIS
HHHHHHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA