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The map label for this gene is lytR [H]

Identifier: 121639156

GI number: 121639156

Start: 3600356

End: 3601852

Strand: Direct

Name: lytR [H]

Synonym: BCG_3296

Alternate gene names: 121639156

Gene position: 3600356-3601852 (Clockwise)

Preceding gene: 121639152

Following gene: 121639157

Centisome position: 82.3

GC content: 66.8

Gene sequence:

>1497_bases
GTGATGTCTGCGCAACGTGTGGTTCGTACGGTTCGTACCGCTCGGGCTATTTCCACGGCACTGGCCGTCGCGATCGTCCT
TGGCACCGGGGTGGCGTGGAGCAGTGTCCGGTCGTTCGAAGACGGCATCTTCCACATGTCGGCGCCCTCGCTGGGGCACG
GCGGCGACGACGGCGCGATCGACATTTTGCTGGTCGGCCTGGACAGCCGTACCGACGCGCACGGCAACCCGTTGAGCGCC
GAGGAATTGGCGACATTGCACGCCGGCGACGAGGAAGCCACCAACACCGACACCATCATCCTGATCCGGGTACCCAACAA
CGGAAAGTCGGCGACCGCAATCTCTATACCGCGGGACTCCTACGTCGCGGCTCCCGGTCTGGGTAAGACCAAGATCAACG
GCGTCTACGGGCAAACCAGAGAGACCAAGCGGGCCGGCCTGGTCCAAGCCGGTGCCTCGCCGACCGAAGCGGCCGCCGCC
GGCACCGAGGCCGGGCGTGAGGCGTTGATCAAGACGGTCGCCGATCTGACCGGCGTCACCGTCGACCACTACGCCGAGAT
CGGGCTGCTCGGTTTCGCGTTGATCGCCGACGCACTCGGCGGCGTCGACGTCTGCCTCAAAGAGCCTGTATACGAACCAC
TTTCGGGTGCCGATTTTCCAGCCGGGCGGCAAAAGCTCAACGGTCCGCAAGCGCTCAGCTTCGTTCGCCAGCGGCATGAT
CTGCCCCGCGGCGACCTGGACCGGGTGGTACGTCAGCAGGCGGTGATGGCGGCGTTGGCCCACCGGGTCATCTCCGGACA
GACGCTATCCAGCCCCGCCACGCTGAAGCGGTTGGAGCAGGCCGTGCAGCGCTCGGTGGTGCTGTCCTCCGGGTGGGACA
TCATGGATTTCGTCCGCCAATTGCAGAAGCTGGCCGGCGGTAACGTTGCCTTCGCCACCATCCCGGTGCTCGACGGCGCC
GGCTGGAGCGACGACGGCATGCAAAGCGTGGTGCGGGTGGATCCGCGTCAGGTGCAGGACTGGGTCGTCGGCCTGCTGCA
CGAGCAGGACCAGGGCAAGACCGACGAGCTGGCCTACACACCCGCCAAGACCACGGCCAACGTGGTCAACGACACCGATA
TCAACGGGCTTGCGGCAGCGGTGTCAAAGGTGTTGAGCTCCAAGGGGTTTACCACCGGATCCGTCGGCAACAACGACGGC
GACCACGTGCCTGGCAGCCAGGTGCGGGCCGCAAAGGCCGACGACCTGGGCGCACAGCAGGTCGCCAAGGAACTGGGCGG
GTTGCCGGTGGTCGCCGATGCGTCAATCGCGCCTGGGTCGGTGCGGGTGGTGCTGGCCAACGACTACAGCGGTCCGGGCT
CCGGGCTGGGGGGTAGTGATCCGAACGGCGTCGTATCGCCGGCCCGCGCGTTCAACCTCGGGTCCGCCGACGACACGACT
CCCCCGCCGTCGCCAATCCTTACCGCCGGCTCCGACGCGCCGGAGTGCATCAACTGA

Upstream 100 bases:

>100_bases
CTAGCCTTTCTGACCTGCCCGCCATGTGTTTGAGTCTGGCACGCCTCGGGCACGCCGGGGTTGGCTACCCGACAGGGCGC
CGTTACACAAGTAGTCTAGT

Downstream 100 bases:

>100_bases
CCACACCGACCACCCTGAGCGGGGCGATCCTGGATCCGATGCTGCGCGCCGACCCGGTCGGCCCGCGCATCACCTACTAT
GACGATGCCACCGGTGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MMSAQRVVRTVRTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGAIDILLVGLDSRTDAHGNPLSA
EELATLHAGDEEATNTDTIILIRVPNNGKSATAISIPRDSYVAAPGLGKTKINGVYGQTRETKRAGLVQAGASPTEAAAA
GTEAGREALIKTVADLTGVTVDHYAEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHD
LPRGDLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKLAGGNVAFATIPVLDGA
GWSDDGMQSVVRVDPRQVQDWVVGLLHEQDQGKTDELAYTPAKTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDG
DHVPGSQVRAAKADDLGAQQVAKELGGLPVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSADDTT
PPPSPILTAGSDAPECIN

Sequences:

>Translated_498_residues
MMSAQRVVRTVRTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGAIDILLVGLDSRTDAHGNPLSA
EELATLHAGDEEATNTDTIILIRVPNNGKSATAISIPRDSYVAAPGLGKTKINGVYGQTRETKRAGLVQAGASPTEAAAA
GTEAGREALIKTVADLTGVTVDHYAEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHD
LPRGDLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKLAGGNVAFATIPVLDGA
GWSDDGMQSVVRVDPRQVQDWVVGLLHEQDQGKTDELAYTPAKTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDG
DHVPGSQVRAAKADDLGAQQVAKELGGLPVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSADDTT
PPPSPILTAGSDAPECIN
>Mature_498_residues
MMSAQRVVRTVRTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGAIDILLVGLDSRTDAHGNPLSA
EELATLHAGDEEATNTDTIILIRVPNNGKSATAISIPRDSYVAAPGLGKTKINGVYGQTRETKRAGLVQAGASPTEAAAA
GTEAGREALIKTVADLTGVTVDHYAEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHD
LPRGDLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKLAGGNVAFATIPVLDGA
GWSDDGMQSVVRVDPRQVQDWVVGLLHEQDQGKTDELAYTPAKTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDG
DHVPGSQVRAAKADDLGAQQVAKELGGLPVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSADDTT
PPPSPILTAGSDAPECIN

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 51314; Mature: 51314

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSAQRVVRTVRTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCE
DILLVGLDSRTDAHGNPLSAEELATLHAGDEEATNTDTIILIRVPNNGKSATAISIPRDS
EEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCC
YVAAPGLGKTKINGVYGQTRETKRAGLVQAGASPTEAAAAGTEAGREALIKTVADLTGVT
EEECCCCCCCEECCCCCCCHHHHHHCCEECCCCCHHHHHCCHHHHHHHHHHHHHHHHCCC
VDHYAEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHD
HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCC
LPRGDLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LQKLAGGNVAFATIPVLDGAGWSDDGMQSVVRVDPRQVQDWVVGLLHEQDQGKTDELAYT
HHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEC
PAKTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQ
CCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHCCCHHH
VAKELGGLPVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSADDTT
HHHHHCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PPPSPILTAGSDAPECIN
CCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MMSAQRVVRTVRTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCE
DILLVGLDSRTDAHGNPLSAEELATLHAGDEEATNTDTIILIRVPNNGKSATAISIPRDS
EEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCC
YVAAPGLGKTKINGVYGQTRETKRAGLVQAGASPTEAAAAGTEAGREALIKTVADLTGVT
EEECCCCCCCEECCCCCCCHHHHHHCCEECCCCCHHHHHCCHHHHHHHHHHHHHHHHCCC
VDHYAEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHD
HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCC
LPRGDLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LQKLAGGNVAFATIPVLDGAGWSDDGMQSVVRVDPRQVQDWVVGLLHEQDQGKTDELAYT
HHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEC
PAKTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQ
CCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHCCCHHH
VAKELGGLPVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSADDTT
HHHHHCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PPPSPILTAGSDAPECIN
CCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]