Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638178
Identifier: 121638178
GI number: 121638178
Start: 2545533
End: 2545985
Strand: Direct
Name: 121638178
Synonym: BCG_2313
Alternate gene names: NA
Gene position: 2545533-2545985 (Clockwise)
Preceding gene: 121638177
Following gene: 121638179
Centisome position: 58.19
GC content: 64.02
Gene sequence:
>453_bases ATGGCGATGGAGATGGCGATGATGGGCCTGCTCGGCACCGTGGTGGGTGCCTCGGCCATGGGCATCGGGGGGATTGCGAA GTCGATCGCGGAAGCGTATGTCCCGGGGGTCGCGGCTGCCAAGGACCGTAGGCAGCAGATGAACGTCGATCTGCAAGCAC GGCGCTACGAGGCGGTGCGAGTGTGGCGGTCTGGGTTGTGCAGTGCCAGCAACGCCTACCGGCAATGGGAGGCCGGGTCT CGGGACACCCATGCGCCCAACGTCGTCGGCGACGAGTGGTTCGAAGGTTTGCGGCCGCACCTGCCCACCACTGGGGAGGC AGCGAAGTTCCGTACCGCTTACGAAGTCCGTTGCGATAACCCAACTCTCATGGTGCTTTCGCTTGAGATTGGCCGTATCG AGAAGGAATGGATGGTGGAGGCGAGCGGCCGGACACCAAAGCACCGGGGATGA
Upstream 100 bases:
>100_bases CACTTCATCCAGGAGGACAGCGGAACCGAACTCGCCGAACGCATGCTCTCCTGGCAGCAGGCAACGTAACCGCGACGGCT GCGGACGAAGGATCGGCAGA
Downstream 100 bases:
>100_bases CTGCGAAGACTCGCGGTTGGTAGCGCACCCGGCTGGTGCGGCGCCGACAAGCTGCCCACATTCGGTGACACTGAATTTCT GCAGCAAAAGCGCGAGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MAMEMAMMGLLGTVVGASAMGIGGIAKSIAEAYVPGVAAAKDRRQQMNVDLQARRYEAVRVWRSGLCSASNAYRQWEAGS RDTHAPNVVGDEWFEGLRPHLPTTGEAAKFRTAYEVRCDNPTLMVLSLEIGRIEKEWMVEASGRTPKHRG
Sequences:
>Translated_150_residues MAMEMAMMGLLGTVVGASAMGIGGIAKSIAEAYVPGVAAAKDRRQQMNVDLQARRYEAVRVWRSGLCSASNAYRQWEAGS RDTHAPNVVGDEWFEGLRPHLPTTGEAAKFRTAYEVRCDNPTLMVLSLEIGRIEKEWMVEASGRTPKHRG >Mature_149_residues AMEMAMMGLLGTVVGASAMGIGGIAKSIAEAYVPGVAAAKDRRQQMNVDLQARRYEAVRVWRSGLCSASNAYRQWEAGSR DTHAPNVVGDEWFEGLRPHLPTTGEAAKFRTAYEVRCDNPTLMVLSLEIGRIEKEWMVEASGRTPKHRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2297_MYCTU (P64979)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: E70733 - RefSeq: NP_216813.1 - RefSeq: NP_336825.1 - EnsemblBacteria: EBMYCT00000003248 - EnsemblBacteria: EBMYCT00000072466 - GeneID: 887789 - GeneID: 924067 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2354 - KEGG: mtu:Rv2297 - TIGR: MT2354 - TubercuList: Rv2297 - GeneTree: EBGT00050000018530 - HOGENOM: HBG128006 - ProtClustDB: CLSK791761 - GO: GO:0005829
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16468; Mature: 16337
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMEMAMMGLLGTVVGASAMGIGGIAKSIAEAYVPGVAAAKDRRQQMNVDLQARRYEAVR CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH VWRSGLCSASNAYRQWEAGSRDTHAPNVVGDEWFEGLRPHLPTTGEAAKFRTAYEVRCDN HHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHCEEEEEEECC PTLMVLSLEIGRIEKEWMVEASGRTPKHRG CEEEEEEECCCCCCHHHEEECCCCCCCCCC >Mature Secondary Structure AMEMAMMGLLGTVVGASAMGIGGIAKSIAEAYVPGVAAAKDRRQQMNVDLQARRYEAVR CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH VWRSGLCSASNAYRQWEAGSRDTHAPNVVGDEWFEGLRPHLPTTGEAAKFRTAYEVRCDN HHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHCEEEEEEECC PTLMVLSLEIGRIEKEWMVEASGRTPKHRG CEEEEEEECCCCCCHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036