Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is yvmC [H]
Identifier: 121638157
GI number: 121638157
Start: 2525335
End: 2526204
Strand: Direct
Name: yvmC [H]
Synonym: BCG_2292
Alternate gene names: 121638157
Gene position: 2525335-2526204 (Clockwise)
Preceding gene: 121638155
Following gene: 121638158
Centisome position: 57.73
GC content: 61.61
Gene sequence:
>870_bases ATGTCATACGTGGCTGCCGAACCAGGCGTGCTGATCTCGCCGACGGACGACTTGCAGAGCCCCCGGTCAGCCCCGGCAGC GCATGACGAAAATGCGGACGGCATAACAGGCGGGACCAGAGACGACTCTGCTCCCAACTCACGGTTTCAGCTAGGCAGGC GCATTCCGGAAGCCACCGCCCAGGAAGGGTTTCTGGTTCGGCCATTCACCCAACAATGTCAGATCATCCACACCGAAGGA GATCATGCTGTTATCGGGGTATCCCCGGGGAACAGTTACTTCTCCCGCCAGCGCCTACGGGATCTCGGGCTTTGGGGTCT CACGAATTTTGATCGTGTGGACTTCGTCTACACCGATGTCCATGTCGCCGAGAGTTACGAAGCGCTAGGCGATTCCGCAA TCGAAGCCCGGCGCAAGGCGGTCAAAAACATCCGCGGCGTCCGCGCCAAGATCACCACCACGGTGAACGAACTCGATCCG GCCGGGGCCCGGCTGTGCGTTCGTCCGATGTCGGAGTTCCAGTCCAACGAGGCATACCGGGAGCTGCATGCGGACCTGCT CACGCGCCTGAAAGACGACGAGGACTTGCGCGCCGTCTGCCAGGACCTAGTGCGGCGCTTCCTGTCCACGAAAGTGGGTC CGCGGCAGGGGGCGACGGCTACTCAAGAGCAGGTGTGCATGGACTACATTTGCGCCGAGGCCCCGCTATTCCTCGACACA CCTGCGATTCTCGGAGTGCCGTCGTCGTTGAATTGCTACCACCAATCACTGCCCCTCGCCGCAATGCTCTACGCCCGAGG ATCGGGACTACGGGCATCGCGCAATCAAGGCCACGCCATTGTTACCCCTGATGGGAGCCCCGCCGAATGA
Upstream 100 bases:
>100_bases TGGGCCGATCGGGCGATAGACATTGTCAGTTCGTGCCGGCACCCTGATCACTGACCTCAACACCGAGCGTCGACCCCGTC CCTATGGTCCAAGGAAAACA
Downstream 100 bases:
>100_bases CCGCGACCGTTCTGCTCGAGGTCCCGTTCTCTGCACGTGGGGATCGGATTCCTGACGCCGTCGCAGAATTACGAACCCGC GAGCCTATCCGCAAGGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPFTQQCQIIHTEG DHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDP AGARLCVRPMSEFQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT PAILGVPSSLNCYHQSLPLAAMLYARGSGLRASRNQGHAIVTPDGSPAE
Sequences:
>Translated_289_residues MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPFTQQCQIIHTEG DHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDP AGARLCVRPMSEFQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT PAILGVPSSLNCYHQSLPLAAMLYARGSGLRASRNQGHAIVTPDGSPAE >Mature_288_residues SYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPFTQQCQIIHTEGD HAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPA GARLCVRPMSEFQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTP AILGVPSSLNCYHQSLPLAAMLYARGSGLRASRNQGHAIVTPDGSPAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31555; Mature: 31423
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA CCCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHH QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV CCCEEECCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHH HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR HHHHHHHHHCHHHHHHHHHHHHHHHCCHHHEEHHHHHCCCCCHHHHHHHHHHHHCCHHHH ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEECC PAILGVPSSLNCYHQSLPLAAMLYARGSGLRASRNQGHAIVTPDGSPAE CHHHCCCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure SYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA CCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHH QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV CCCEEECCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHH HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR HHHHHHHHHCHHHHHHHHHHHHHHHCCHHHEEHHHHHCCCCCHHHHHHHHHHHHCCHHHH ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEECC PAILGVPSSLNCYHQSLPLAAMLYARGSGLRASRNQGHAIVTPDGSPAE CHHHCCCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]