Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638155
Identifier: 121638155
GI number: 121638155
Start: 2524554
End: 2524883
Strand: Direct
Name: 121638155
Synonym: BCG_2290
Alternate gene names: NA
Gene position: 2524554-2524883 (Clockwise)
Preceding gene: 121638154
Following gene: 121638157
Centisome position: 57.71
GC content: 66.67
Gene sequence:
>330_bases GTGAACCGTCACTCGACGGCAGCGAGCGATCGCGGGCTGCAGGCCGAACGGACGACGCTGGCCTGGACCCGGACGGCCTT TGCGTTGCTGGTCAACGGCGTGTTGCTGACGCTCAAGGACACGCAAGGCGCCGACGGGCCGGCTGGGCTGATCCCGGCCG GCCTAGCTGGTGCTGCGGCCTCGTGCTGCTATGTGATCGCTCTACAACGCCAACGAGCACTTTCGCACCGCCCGCTACCG GCACGAATCACTCCCCGCGGCCAGGTCCACATCCTCGCGACAGCGGTGCTGGTGCTTATGGTCGTCACCGCCTTTGCTCA ACTGCTCTAG
Upstream 100 bases:
>100_bases TGCCATTGCCCCGTCACCCCACACCGGGCTACCTCGCGGTGGGGCTCTGCGTGGTCGGGGTCGTCGCGCTCGCATTGGTG GTAGCCAAGGCGATCACCGG
Downstream 100 bases:
>100_bases CGCGGCGAACAGACGCAAAAGCCCCCGCACGCACGGAGTGTCGGGGGCTTTTGCGTCTACTCGCCAAATGCGATCGTGGC CGATGGCGGCGCGGACCTTC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MNRHSTAASDRGLQAERTTLAWTRTAFALLVNGVLLTLKDTQGADGPAGLIPAGLAGAAASCCYVIALQRQRALSHRPLP ARITPRGQVHILATAVLVLMVVTAFAQLL
Sequences:
>Translated_109_residues MNRHSTAASDRGLQAERTTLAWTRTAFALLVNGVLLTLKDTQGADGPAGLIPAGLAGAAASCCYVIALQRQRALSHRPLP ARITPRGQVHILATAVLVLMVVTAFAQLL >Mature_109_residues MNRHSTAASDRGLQAERTTLAWTRTAFALLVNGVLLTLKDTQGADGPAGLIPAGLAGAAASCCYVIALQRQRALSHRPLP ARITPRGQVHILATAVLVLMVVTAFAQLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2273_MYCTU (P64971)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: E70730 - RefSeq: NP_216789.1 - RefSeq: NP_336803.1 - EnsemblBacteria: EBMYCT00000001063 - EnsemblBacteria: EBMYCT00000071079 - GeneID: 888440 - GeneID: 924090 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2334 - KEGG: mtu:Rv2273 - TIGR: MT2334 - TubercuList: Rv2273 - GeneTree: EBGT00050000018711 - HOGENOM: HBG565230 - OMA: WTRTALA - ProtClustDB: CLSK791742 - InterPro: IPR003807
Pfam domain/function: PF02656 DUF202
EC number: NA
Molecular weight: Translated: 11440; Mature: 11440
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x16c462f0)-; HASH(0x16ff2f04)-;
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRHSTAASDRGLQAERTTLAWTRTAFALLVNGVLLTLKDTQGADGPAGLIPAGLAGAAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHH SCCYVIALQRQRALSHRPLPARITPRGQVHILATAVLVLMVVTAFAQLL HHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH >Mature Secondary Structure MNRHSTAASDRGLQAERTTLAWTRTAFALLVNGVLLTLKDTQGADGPAGLIPAGLAGAAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHH SCCYVIALQRQRALSHRPLPARITPRGQVHILATAVLVLMVVTAFAQLL HHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036