Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638119
Identifier: 121638119
GI number: 121638119
Start: 2488134
End: 2488901
Strand: Direct
Name: 121638119
Synonym: BCG_2254
Alternate gene names: NA
Gene position: 2488134-2488901 (Clockwise)
Preceding gene: 121638117
Following gene: 121638123
Centisome position: 56.88
GC content: 64.97
Gene sequence:
>768_bases ATGTTGTTGCCGGCAGCGAATGTCATCATGCAGCTGGCAGTGCCGGGTGTCGGGTATGGCGTGCTGGAAAGCCCGGTGGA CAGCGGCAACGTCTACAAGCATCCGTTCAAGCGGGCCCGGACCACCGGCACCTACCTGGCGGTGGCGACCATCGGGACGG AATCCGACCGAGCGCTGATCCGGGGTGCCGTGGACGTCGCGCACCGGCAGGTTCGGTCGACGGCCTCGAGCCCGGTGTCC TATAACGCCTTCGACCCGAAGTTGCAGCTGTGGGTGGCGGCGTGTCTGTACCGCTACTTCGTGGACCAGCACGAGTTTCT GTACGGCCCACTCGAAGATGCCACCGCCGACGCCGTCTACCAAGACGCCAAACGGTTAGGGACCACGCTGCAGGTGCCGG AGGGGATGTGGCCGCCGGACCGGGTCGCGTTCGACGAGTACTGGAAGCGCTCGCTTGATGGGCTGCAGATCGACGCGCCG GTGCGCGAGCATCTTCGCGGGGTGGCCTCGGTAGCGTTTCTCCCGTGGCCGTTGCGCGCGGTGGCCGGGCCGTTCAACCT GTTTGCGACGACGGGATTCTTGGCACCGGAGTTCCGCGCGATGATGCAGCTGGAGTGGTCACAGGCCCAGCAGCGTCGCT TCGAGTGGTTACTTTCCGTGCTACGGTTAGCCGACCGGCTGATTCCGCATCGGGCCTGGATCTTCGTTTACCAGCTTTAC TTGTGGGACATGCGGTTTCGCGCCCGACACGGCCGCCGAATCGTCTGA
Upstream 100 bases:
>100_bases CACACGTGGTCTACGCTCAGCTATTTATGACCTCATACGGCAGCTATCCACGATGAAGCGGCCAGCTACCCGGGTTGCCG ACCTGTTGAACCCGGCGGCA
Downstream 100 bases:
>100_bases TAGAGCCCGGCCGAGTGTGAGCCTGACAGCCCGACACCGGCGGCGTGTGTCGCGTCGCCAGGTTCACGCTCGGCGATCTA GAGCCGCCGAAAACCTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVS YNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAP VREHLRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY LWDMRFRARHGRRIV
Sequences:
>Translated_255_residues MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVS YNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAP VREHLRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY LWDMRFRARHGRRIV >Mature_255_residues MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVS YNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAP VREHLRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY LWDMRFRARHGRRIV
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2237_MYCTU (P64957)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: A70778 - RefSeq: NP_216753.1 - RefSeq: NP_336766.1 - EnsemblBacteria: EBMYCT00000003769 - EnsemblBacteria: EBMYCT00000070538 - GeneID: 887840 - GeneID: 924130 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2296 - KEGG: mtu:Rv2237 - TIGR: MT2296 - TubercuList: Rv2237 - GeneTree: EBGT00050000016411 - HOGENOM: HBG728992 - OMA: WKRARTT - ProtClustDB: CLSK791713 - InterPro: IPR018713
Pfam domain/function: PF09995 DUF2236
EC number: NA
Molecular weight: Translated: 29068; Mature: 29068
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x16de056c)-; HASH(0x1694c434)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI CCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCHHHH RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEECCCCHHHHHHHH QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA HHHHHHCCEEECCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCHHHH VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY HCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LWDMRFRARHGRRIV HHHHHHHHCCCCCCH >Mature Secondary Structure MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI CCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCHHHH RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEECCCCHHHHHHHH QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA HHHHHHCCEEECCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCHHHH VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY HCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LWDMRFRARHGRRIV HHHHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036