Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is aceE
Identifier: 121638123
GI number: 121638123
Start: 2491184
End: 2493889
Strand: Direct
Name: aceE
Synonym: BCG_2258
Alternate gene names: 121638123
Gene position: 2491184-2493889 (Clockwise)
Preceding gene: 121638119
Following gene: 121638124
Centisome position: 56.95
GC content: 64.71
Gene sequence:
>2706_bases GTGGCGTCGTATTTGCCCGACATTGATCCCGAGGAGACCTCGGAGTGGCTGGAGTCCTTTGACACGCTGCTGCAACGCTG CGGCCCGTCGCGGGCCCGCTACCTGATGTTGCGGCTGCTAGAGCGGGCCGGCGAGCAGCGGGTGGCCATCCCGGCATTGA CGTCTACCGACTATGTCAACACCATCCCGACCGAGCTGGAGCCGTGGTTCCCCGGCGACGAAGACGTCGAACGTCGTTAT CGAGCGTGGATCAGATGGAATGCGGCCATCATGGTGCACCGTGCGCAACGACCGGGTGTGGGCGTGGGTGGCCATATCTC GACCTACGCGTCGTCCGCGGCGCTCTATGAGGTCGGTTTCAACCACTTCTTCCGCGGCAAGTCGCACCCGGGCGGCGGCG ATCAGGTGTTCATCCAGGGCCACGCTTCCCCGGGAATCTACGCGCGCGCCTTCCTCGAAGGGCGGTTGACCGCCGAGCAA CTCGACGGATTCCGCCAGGAACACAGCCATGTCGGCGGCGGGTTGCCGTCCTATCCGCACCCGCGGCTCATGCCCGACTT CTGGGAATTCCCCACCGTGTCGATGGGTTTGGGCCCGCTCAACGCCATCTACCAGGCACGGTTCAACCACTATCTGCATG ACCGCGGTATCAAAGACACCTCCGATCAACACGTGTGGTGTTTTTTGGGCGACGGCGAGATGGACGAACCCGAGAGCCGT GGGCTGGCCCACGTCGGCGCGCTGGAAGGCTTGGACAACTTGACCTTCGTGATCAACTGCAATCTGCAGCGACTCGACGG CCCGGTGCGCGGCAACGGCAAGATCATCCAGGAGCTGGAGTCGTTCTTCCGCGGTGCCGGCTGGAACGTCATCAAGGTGG TGTGGGGCCGCGAATGGGATGCCCTGCTGCACGCCGACCGCGACGGTGCGCTGGTGAATTTAATGAATACAACACCCGAT GGCGATTACCAGACCTATAAGGCCAACGACGGCGGCTACGTGCGTGACCACTTCTTCGGCCGCGACCCACGCACCAAGGC GCTGGTGGAGAACATGAGCGACCAGGATATCTGGAACCTCAAACGGGGCGGCCACGATTACCGCAAGGTTTACGCCGCCT ACCGCGCCGCCGTCGACCACAAGGGACAGCCGACGGTGATCCTGGCCAAGACCATCAAAGGCTACGCGCTGGGCAAGCAT TTCGAAGGACGCAATGCCACCCACCAGATGAAAAAACTGACCCTGGAAGACCTTAAGGAGTTTCGTGACACGCAGCGGAT TCCGGTCAGCGACGCCCAGCTTGAAGAGAATCCGTACCTGCCGCCCTACTACCACCCCGGCCTCAACGCCCCGGAGATTC GTTACATGCTCGACCGGCGCCGGGCCCTCGGGGGCTTTGTTCCCGAGCGCAGGACCAAGTCCAAAGCGCTGACCCTGCCG GGTCGCGACATCTACGCGCCGCTGAAAAAGGGCTCTGGGCACCAGGAGGTGGCCACCACCATGGCGACGGTGCGCACGTT CAAAGAAGTGTTGCGCGACAAGCAGATCGGGCCGCGGATAGTCCCGATCATTCCCGACGAGGCCCGCACCTTCGGGATGG ACTCCTGGTTCCCGTCGCTAAAGATCTATAACCGCAATGGCCAGCTGTATACCGCGGTTGACGCCGACCTGATGCTGGCC TACAAGGAGAGCGAAGTCGGGCAGATCCTGCACGAGGGCATCAACGAAGCCGGGTCGGTGGGCTCGTTCATCGCGGCCGG CACCTCGTATGCGACGCACAACGAACCGATGATCCCCATTTACATCTTCTACTCGATGTTCGGCTTCCAGCGCACCGGCG ATAGCTTCTGGGCCGCGGCCGACCAGATGGCTCGAGGGTTCGTGCTCGGGGCCACCGCCGGGCGCACCACCCTGACCGGT GAGGGCCTGCAACACGCCGACGGTCACTCGTTGCTGCTGGCCGCCACCAACCCGGCGGTGGTTGCCTACGACCCGGCCTT CGCCTACGAAATCGCCTACATCGTGGAAAGCGGACTGGCCAGGATGTGCGGGGAGAACCCGGAGAACATCTTCTTCTACA TCACCGTCTACAACGAGCCGTACGTGCAGCCGCCGGAGCCGGAGAACTTCGATCCCGAGGGCGTGCTGCGGGGTATCTAC CGCTATCACGCGGCCACCGAGCAACGCACCAACAAGGCGCAGATCCTGGCCTCCGGGGTAGCGATGCCCGCGGCGCTGCG GGCAGCACAGATGCTGGCCGCCGAGTGGGATGTCGCCGCCGACGTGTGGTCGGTGACCAGTTGGGGCGAGCTAAACCGCG ACGGGGTGGCCATCGAGACCGAGAAGCTCCGCCACCCCGATCGGCCGGCGGGCGTGCCCTACGTGACGAGAGCGCTGGAG AATGCTCGGGGCCCGGTGATCGCGGTGTCGGACTGGATGCGCGCGGTCCCCGAGCAGATCCGACCGTGGGTGCCGGGCAC ATACCTCACGTTGGGCACCGACGGGTTCGGCTTTTCCGACACTCGGCCCGCCGCTCGCCGCTACTTCAACACCGACGCCG AATCCCAGGTGGTCGCGGTTTTGGAGGCGTTGGCGGGCGACGGCGAGATCGACCCATCGGTGCCGGTCGCGGCCGCCCGC CAGTACCGGATCGACGACGTGGCGGCTGCGCCCGAGCAGACCACGGATCCCGGTCCCGGGGCCTAA
Upstream 100 bases:
>100_bases CAGGAGTAGTGCGTTGACCACCGATTTCGCCCGCCACGATCTGGCCCAAAACTCAAACAGCGCAAGCGAACCCGACCGAG TTCGGGTGATCCGCGAGGGT
Downstream 100 bases:
>100_bases CGCCGGCGAGCCGACCGCCTTTGGCCGAATCTTCCAGAAATCTGGCGTAGCTTTTAGGAGTGAACGACAATCAGTTGGCT CCAGTTGCCCGCCCGAGGTC
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 901; Mature: 900
Protein sequence:
>901_residues MASYLPDIDPEETSEWLESFDTLLQRCGPSRARYLMLRLLERAGEQRVAIPALTSTDYVNTIPTELEPWFPGDEDVERRY RAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHPGGGDQVFIQGHASPGIYARAFLEGRLTAEQ LDGFRQEHSHVGGGLPSYPHPRLMPDFWEFPTVSMGLGPLNAIYQARFNHYLHDRGIKDTSDQHVWCFLGDGEMDEPESR GLAHVGALEGLDNLTFVINCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVWGREWDALLHADRDGALVNLMNTTPD GDYQTYKANDGGYVRDHFFGRDPRTKALVENMSDQDIWNLKRGGHDYRKVYAAYRAAVDHKGQPTVILAKTIKGYALGKH FEGRNATHQMKKLTLEDLKEFRDTQRIPVSDAQLEENPYLPPYYHPGLNAPEIRYMLDRRRALGGFVPERRTKSKALTLP GRDIYAPLKKGSGHQEVATTMATVRTFKEVLRDKQIGPRIVPIIPDEARTFGMDSWFPSLKIYNRNGQLYTAVDADLMLA YKESEVGQILHEGINEAGSVGSFIAAGTSYATHNEPMIPIYIFYSMFGFQRTGDSFWAAADQMARGFVLGATAGRTTLTG EGLQHADGHSLLLAATNPAVVAYDPAFAYEIAYIVESGLARMCGENPENIFFYITVYNEPYVQPPEPENFDPEGVLRGIY RYHAATEQRTNKAQILASGVAMPAALRAAQMLAAEWDVAADVWSVTSWGELNRDGVAIETEKLRHPDRPAGVPYVTRALE NARGPVIAVSDWMRAVPEQIRPWVPGTYLTLGTDGFGFSDTRPAARRYFNTDAESQVVAVLEALAGDGEIDPSVPVAAAR QYRIDDVAAAPEQTTDPGPGA
Sequences:
>Translated_901_residues MASYLPDIDPEETSEWLESFDTLLQRCGPSRARYLMLRLLERAGEQRVAIPALTSTDYVNTIPTELEPWFPGDEDVERRY RAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHPGGGDQVFIQGHASPGIYARAFLEGRLTAEQ LDGFRQEHSHVGGGLPSYPHPRLMPDFWEFPTVSMGLGPLNAIYQARFNHYLHDRGIKDTSDQHVWCFLGDGEMDEPESR GLAHVGALEGLDNLTFVINCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVWGREWDALLHADRDGALVNLMNTTPD GDYQTYKANDGGYVRDHFFGRDPRTKALVENMSDQDIWNLKRGGHDYRKVYAAYRAAVDHKGQPTVILAKTIKGYALGKH FEGRNATHQMKKLTLEDLKEFRDTQRIPVSDAQLEENPYLPPYYHPGLNAPEIRYMLDRRRALGGFVPERRTKSKALTLP GRDIYAPLKKGSGHQEVATTMATVRTFKEVLRDKQIGPRIVPIIPDEARTFGMDSWFPSLKIYNRNGQLYTAVDADLMLA YKESEVGQILHEGINEAGSVGSFIAAGTSYATHNEPMIPIYIFYSMFGFQRTGDSFWAAADQMARGFVLGATAGRTTLTG EGLQHADGHSLLLAATNPAVVAYDPAFAYEIAYIVESGLARMCGENPENIFFYITVYNEPYVQPPEPENFDPEGVLRGIY RYHAATEQRTNKAQILASGVAMPAALRAAQMLAAEWDVAADVWSVTSWGELNRDGVAIETEKLRHPDRPAGVPYVTRALE NARGPVIAVSDWMRAVPEQIRPWVPGTYLTLGTDGFGFSDTRPAARRYFNTDAESQVVAVLEALAGDGEIDPSVPVAAAR QYRIDDVAAAPEQTTDPGPGA >Mature_900_residues ASYLPDIDPEETSEWLESFDTLLQRCGPSRARYLMLRLLERAGEQRVAIPALTSTDYVNTIPTELEPWFPGDEDVERRYR AWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHPGGGDQVFIQGHASPGIYARAFLEGRLTAEQL DGFRQEHSHVGGGLPSYPHPRLMPDFWEFPTVSMGLGPLNAIYQARFNHYLHDRGIKDTSDQHVWCFLGDGEMDEPESRG LAHVGALEGLDNLTFVINCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVWGREWDALLHADRDGALVNLMNTTPDG DYQTYKANDGGYVRDHFFGRDPRTKALVENMSDQDIWNLKRGGHDYRKVYAAYRAAVDHKGQPTVILAKTIKGYALGKHF EGRNATHQMKKLTLEDLKEFRDTQRIPVSDAQLEENPYLPPYYHPGLNAPEIRYMLDRRRALGGFVPERRTKSKALTLPG RDIYAPLKKGSGHQEVATTMATVRTFKEVLRDKQIGPRIVPIIPDEARTFGMDSWFPSLKIYNRNGQLYTAVDADLMLAY KESEVGQILHEGINEAGSVGSFIAAGTSYATHNEPMIPIYIFYSMFGFQRTGDSFWAAADQMARGFVLGATAGRTTLTGE GLQHADGHSLLLAATNPAVVAYDPAFAYEIAYIVESGLARMCGENPENIFFYITVYNEPYVQPPEPENFDPEGVLRGIYR YHAATEQRTNKAQILASGVAMPAALRAAQMLAAEWDVAADVWSVTSWGELNRDGVAIETEKLRHPDRPAGVPYVTRALEN ARGPVIAVSDWMRAVPEQIRPWVPGTYLTLGTDGFGFSDTRPAARRYFNTDAESQVVAVLEALAGDGEIDPSVPVAAARQ YRIDDVAAAPEQTTDPGPGA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=890, Percent_Identity=51.9101123595506, Blast_Score=906, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ODP1_MYCTU (Q10504)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: E70778 - RefSeq: NP_216757.1 - RefSeq: NP_336771.1 - ProteinModelPortal: Q10504 - SMR: Q10504 - EnsemblBacteria: EBMYCT00000000535 - EnsemblBacteria: EBMYCT00000072620 - GeneID: 887246 - GeneID: 924124 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2301 - KEGG: mtu:Rv2241 - TIGR: MT2301 - TubercuList: Rv2241 - GeneTree: EBGT00050000016271 - HOGENOM: HBG289271 - OMA: EVDRHFV - ProtClustDB: PRK09405 - BRENDA: 1.2.4.1 - GO: GO:0006096 - InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 - Gene3D: G3DSA:3.40.50.920 - PIRSF: PIRSF000156 - TIGRFAMs: TIGR00759
Pfam domain/function: PF00456 Transketolase_N; SSF52922 Transketo_C_like
EC number: =1.2.4.1
Molecular weight: Translated: 100218; Mature: 100087
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYLPDIDPEETSEWLESFDTLLQRCGPSRARYLMLRLLERAGEQRVAIPALTSTDYVN CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC TIPTELEPWFPGDEDVERRYRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGF CCCCCCCCCCCCCHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHH NHFFRGKSHPGGGDQVFIQGHASPGIYARAFLEGRLTAEQLDGFRQEHSHVGGGLPSYPH HHHHCCCCCCCCCCEEEEEECCCCCCEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC PRLMPDFWEFPTVSMGLGPLNAIYQARFNHYLHDRGIKDTSDQHVWCFLGDGEMDEPESR CCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHC GLAHVGALEGLDNLTFVINCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVWGREWD CCCHHHHHCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHH ALLHADRDGALVNLMNTTPDGDYQTYKANDGGYVRDHFFGRDPRTKALVENMSDQDIWNL HHEECCCCCCEEEEECCCCCCCEEEEECCCCCEEEHHCCCCCCCHHHHHHCCCCCHHHHH KRGGHDYRKVYAAYRAAVDHKGQPTVILAKTIKGYALGKHFEGRNATHQMKKLTLEDLKE HCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH FRDTQRIPVSDAQLEENPYLPPYYHPGLNAPEIRYMLDRRRALGGFVPERRTKSKALTLP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECC GRDIYAPLKKGSGHQEVATTMATVRTFKEVLRDKQIGPRIVPIIPDEARTFGMDSWFPSL CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCCCE KIYNRNGQLYTAVDADLMLAYKESEVGQILHEGINEAGSVGSFIAAGTSYATHNEPMIPI EEECCCCCEEEEECCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEHH YIFYSMFGFQRTGDSFWAAADQMARGFVLGATAGRTTLTGEGLQHADGHSLLLAATNPAV HHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCEECCCCCCCCCCCEEEEEECCCEE VAYDPAFAYEIAYIVESGLARMCGENPENIFFYITVYNEPYVQPPEPENFDPEGVLRGIY EEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH RYHAATEQRTNKAQILASGVAMPAALRAAQMLAAEWDVAADVWSVTSWGELNRDGVAIET HHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEEH EKLRHPDRPAGVPYVTRALENARGPVIAVSDWMRAVPEQIRPWVPGTYLTLGTDGFGFSD HHCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC TRPAARRYFNTDAESQVVAVLEALAGDGEIDPSVPVAAARQYRIDDVAAAPEQTTDPGPG CCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCC A C >Mature Secondary Structure ASYLPDIDPEETSEWLESFDTLLQRCGPSRARYLMLRLLERAGEQRVAIPALTSTDYVN CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC TIPTELEPWFPGDEDVERRYRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGF CCCCCCCCCCCCCHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHH NHFFRGKSHPGGGDQVFIQGHASPGIYARAFLEGRLTAEQLDGFRQEHSHVGGGLPSYPH HHHHCCCCCCCCCCEEEEEECCCCCCEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC PRLMPDFWEFPTVSMGLGPLNAIYQARFNHYLHDRGIKDTSDQHVWCFLGDGEMDEPESR CCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHC GLAHVGALEGLDNLTFVINCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVWGREWD CCCHHHHHCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHH ALLHADRDGALVNLMNTTPDGDYQTYKANDGGYVRDHFFGRDPRTKALVENMSDQDIWNL HHEECCCCCCEEEEECCCCCCCEEEEECCCCCEEEHHCCCCCCCHHHHHHCCCCCHHHHH KRGGHDYRKVYAAYRAAVDHKGQPTVILAKTIKGYALGKHFEGRNATHQMKKLTLEDLKE HCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH FRDTQRIPVSDAQLEENPYLPPYYHPGLNAPEIRYMLDRRRALGGFVPERRTKSKALTLP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECC GRDIYAPLKKGSGHQEVATTMATVRTFKEVLRDKQIGPRIVPIIPDEARTFGMDSWFPSL CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCCCE KIYNRNGQLYTAVDADLMLAYKESEVGQILHEGINEAGSVGSFIAAGTSYATHNEPMIPI EEECCCCCEEEEECCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEHH YIFYSMFGFQRTGDSFWAAADQMARGFVLGATAGRTTLTGEGLQHADGHSLLLAATNPAV HHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCEECCCCCCCCCCCEEEEEECCCEE VAYDPAFAYEIAYIVESGLARMCGENPENIFFYITVYNEPYVQPPEPENFDPEGVLRGIY EEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH RYHAATEQRTNKAQILASGVAMPAALRAAQMLAAEWDVAADVWSVTSWGELNRDGVAIET HHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEEH EKLRHPDRPAGVPYVTRALENARGPVIAVSDWMRAVPEQIRPWVPGTYLTLGTDGFGFSD HHCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC TRPAARRYFNTDAESQVVAVLEALAGDGEIDPSVPVAAARQYRIDDVAAAPEQTTDPGPG CCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036