Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638100
Identifier: 121638100
GI number: 121638100
Start: 2464879
End: 2465631
Strand: Direct
Name: 121638100
Synonym: BCG_2235
Alternate gene names: NA
Gene position: 2464879-2465631 (Clockwise)
Preceding gene: 121638099
Following gene: 121638102
Centisome position: 56.35
GC content: 67.07
Gene sequence:
>753_bases ATGGCGAAACCCCGAAATGCCGCTGAAAGCAAGGCCGCCAAAGCTCAGGCAAACGCTGCTCGTAAGGCTGCCGCCCGCCA GCGCCGCGCTCAGCTGTGGCAAGCGTTCACCCTGCAGCGCAAGGAGGATAAGCGCCTGCTGCCGTACATGATTGGTGCTT TCTTGCTGATCGTGGGCGCATCGGTGGGGGTCGGGGTGTGGGCTGGCGGGTTCACCATGCTCACGATGATCCCGCTGGGG GTGCTGCTGGGTGCACTGGTGGCGTTCGTCATCTTCGGCCGGCGAGCCCAGCGAACGGTTTACCGCAAAGCCGAAGGCCA AACCGGCGCAGCCGCCTGGGCGCTGGACAACCTGCGGGGCAAGTGGCGGGTGACGCCCGGGGTGGCCGCCACCGGCAACC TCGACGCCGTGCACCGGGTGATCGGCCGGCCCGGTGTCATCTTCGTCGGCGAGGGATCAGCGGCCCGCGTCAAACCACTG CTGGCTCAGGAGAAAAAGCGCACCGCGCGACTGGTCGGGGACGTGCCGATCTACGACATTATCGTCGGCAACGGCGATGG CGAGGTTCCGCTGGCCAAGTTGGAGCGCCACCTCACCCGCCTTCCGGCCAACATCACGGTCAAGCAGATGGACACGGTGG AGTCGCGACTGGCGGCGCTGGGTTCGCGTGCCGGTGCGGGCGTCATGCCCAAGGGACCGCTACCCACCACGGCCAAGATG CGCAGCGTCCAGCGCACGGTCCGCCGTAAGTAA
Upstream 100 bases:
>100_bases TGGTTAGGTCGTCATATCGGGCGGGCCGGCTCTACGAACAGGCACGTAACTCACGGGCCTTGGCATCCCGCTAGCCAGCG TTTACGTATTCTGGACGATT
Downstream 100 bases:
>100_bases CGCGGCTCAGCGTCGCACCACCGCCGTAGCAGTGAGCCGATCGTGCAGCCCACGCCCGTCCGAGTCGGTGAACAGCGGCG GAACCACCAGCCCGATCAGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMLTMIPLG VLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPL LAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM RSVQRTVRRK
Sequences:
>Translated_250_residues MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMLTMIPLG VLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPL LAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM RSVQRTVRRK >Mature_249_residues AKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMLTMIPLGV LLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLL AQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMR SVQRTVRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021315 [H]
Pfam domain/function: PF11139 DUF2910 [H]
EC number: NA
Molecular weight: Translated: 26830; Mature: 26699
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SVGVGVWAGGFTMLTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCCC KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI CEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEE IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM EEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH RSVQRTVRRK HHHHHHHCCC >Mature Secondary Structure AKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SVGVGVWAGGFTMLTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCCC KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI CEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEE IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM EEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH RSVQRTVRRK HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]