Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638093
Identifier: 121638093
GI number: 121638093
Start: 2455834
End: 2456970
Strand: Direct
Name: 121638093
Synonym: BCG_2228
Alternate gene names: NA
Gene position: 2455834-2456970 (Clockwise)
Preceding gene: 121638090
Following gene: 121638094
Centisome position: 56.14
GC content: 67.28
Gene sequence:
>1137_bases GTGTACGATTCCTTGGACTTCGACGCCCTCGAGGCCGCCGGAATTGCCAACCCACGCGAGCGGGCCGGCTTGCTCACCTA CCTGGATGAGCTTGGCTTCACGGTCGAAGAGATGGTGCAAGCCGAACGCCGCGGCCGGTTGTTCGGGCTGGCCGGTGACG TCCTGCTATGGTCCGGGCCCCCGATCTACACCCTGGCGACCGCGGCTGACGAACTGGGGTTGTCAGCCGACGACGTCGCA CGCGCGTGGAGTTTGCTCGGCCTCACCGTCGCGGGTCCCGACGTTCCCACGCTGAGCCAGGCCGACGTCGACGCCCTGGC GACCTGGGTCGCACTGAAGGCGCTGGTGGGTGAGGACGGCGCATTCGGCCTGCTGCGAGTGCTCGGCACTGCCATGGCCC GACTCGCCGAGGCCGAGTCGACCATGATCCGCGCCGGGTCACCGAACATCCAAATGACGCACACCCACGACGAACTTGCC ACGGCACGGGCCTATCGCGCGGCTGCGGAGTTCGTCCCCCGGATCGGTGCGCTGATCGACACCGTCCACCGTCACCACCT GGCCAGCGCACGAACCTACTTTGAAGGCGTCATTGGCGACACGTCGGCAAGCGTGACGTGCGGTATCGGCTTTGCGGATC TGTCCAGCTTCACCGCGTTGACCCAGGCGCTCACCCCCGCGCAGTTGCAGGACCTGCTCACCGAATTCGACGCCGCCGTC ACCGACGTGGTGCATGCCGACGGTGGCCGGTTGGTGAAGTTCATCGGCGACGCCGTGATGTGGGTGAGCTCGTCGCCCGA ACGACTGGTGCGGGCGGCGGTGGATCTCGTCGATCATCCGGGTGCGCGCGCGGCCGAACTGCAGGTCCGTGCCGGTCTTG CCTATGGCACGGTGCTGGCCCTTAACGGTGACTACTTCGGCAACCCGGTCAACCTGGCTGCGCGCCTGGTGGCGGCCGCA GCGCCAGGGCAGATCCTGGCCGCAGCGCAACTCCGCGACATGTTGCCAGACTGGCCTGCCCTCGCCCATGGCCCATTGAC GCTCAAGGGGTTTGACGCCCCGGTGATGGCCTTCGAACTGCACGACAACCCTCGTGCGAGGGATGCTGACACGCCAAGCC CCGCCGCCAGTGATTAG
Upstream 100 bases:
>100_bases AGCTCGCGATGGCGGTCTTCCAGCGGTCCGTGTATCAGCTCTGGCACATCGCTCACGGCGTCCCACCCTAATGGGCGTCC CTGCTGGCACACTTAGGCAG
Downstream 100 bases:
>100_bases GGTGGTTGCCCGTGACCACCGAACCGGGTTACCTATCCCCCTCCGTCGCCGTCGCGACCTCGATGCCGAAACGTGGTGTC GGCGCTGCGGTGTTGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MYDSLDFDALEAAGIANPRERAGLLTYLDELGFTVEEMVQAERRGRLFGLAGDVLLWSGPPIYTLATAADELGLSADDVA RAWSLLGLTVAGPDVPTLSQADVDALATWVALKALVGEDGAFGLLRVLGTAMARLAEAESTMIRAGSPNIQMTHTHDELA TARAYRAAAEFVPRIGALIDTVHRHHLASARTYFEGVIGDTSASVTCGIGFADLSSFTALTQALTPAQLQDLLTEFDAAV TDVVHADGGRLVKFIGDAVMWVSSSPERLVRAAVDLVDHPGARAAELQVRAGLAYGTVLALNGDYFGNPVNLAARLVAAA APGQILAAAQLRDMLPDWPALAHGPLTLKGFDAPVMAFELHDNPRARDADTPSPAASD
Sequences:
>Translated_378_residues MYDSLDFDALEAAGIANPRERAGLLTYLDELGFTVEEMVQAERRGRLFGLAGDVLLWSGPPIYTLATAADELGLSADDVA RAWSLLGLTVAGPDVPTLSQADVDALATWVALKALVGEDGAFGLLRVLGTAMARLAEAESTMIRAGSPNIQMTHTHDELA TARAYRAAAEFVPRIGALIDTVHRHHLASARTYFEGVIGDTSASVTCGIGFADLSSFTALTQALTPAQLQDLLTEFDAAV TDVVHADGGRLVKFIGDAVMWVSSSPERLVRAAVDLVDHPGARAAELQVRAGLAYGTVLALNGDYFGNPVNLAARLVAAA APGQILAAAQLRDMLPDWPALAHGPLTLKGFDAPVMAFELHDNPRARDADTPSPAASD >Mature_378_residues MYDSLDFDALEAAGIANPRERAGLLTYLDELGFTVEEMVQAERRGRLFGLAGDVLLWSGPPIYTLATAADELGLSADDVA RAWSLLGLTVAGPDVPTLSQADVDALATWVALKALVGEDGAFGLLRVLGTAMARLAEAESTMIRAGSPNIQMTHTHDELA TARAYRAAAEFVPRIGALIDTVHRHHLASARTYFEGVIGDTSASVTCGIGFADLSSFTALTQALTPAQLQDLLTEFDAAV TDVVHADGGRLVKFIGDAVMWVSSSPERLVRAAVDLVDHPGARAAELQVRAGLAYGTVLALNGDYFGNPVNLAARLVAAA APGQILAAAQLRDMLPDWPALAHGPLTLKGFDAPVMAFELHDNPRARDADTPSPAASD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate cyclase domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2212_MYCTU (P64265)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: E70786 - RefSeq: NP_216728.1 - RefSeq: NP_336740.1 - ProteinModelPortal: P64265 - SMR: P64265 - EnsemblBacteria: EBMYCT00000002338 - EnsemblBacteria: EBMYCT00000070730 - GeneID: 887979 - GeneID: 924157 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2268 - KEGG: mtu:Rv2212 - TIGR: MT2268 - TubercuList: Rv2212 - GeneTree: EBGT00050000014811 - HOGENOM: HBG565223 - OMA: VGDEVMF - ProtClustDB: CLSK791701 - InterPro: IPR001054 - Gene3D: G3DSA:3.30.70.1230 - SMART: SM00044
Pfam domain/function: PF00211 Guanylate_cyc; SSF55073 A/G_cyclase
EC number: NA
Molecular weight: Translated: 39775; Mature: 39775
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS50125 GUANYLATE_CYCLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDSLDFDALEAAGIANPRERAGLLTYLDELGFTVEEMVQAERRGRLFGLAGDVLLWSGP CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCEEEECCC PIYTLATAADELGLSADDVARAWSLLGLTVAGPDVPTLSQADVDALATWVALKALVGEDG CCEEEEHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC AFGLLRVLGTAMARLAEAESTMIRAGSPNIQMTHTHDELATARAYRAAAEFVPRIGALID HHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH TVHRHHLASARTYFEGVIGDTSASVTCGIGFADLSSFTALTQALTPAQLQDLLTEFDAAV HHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TDVVHADGGRLVKFIGDAVMWVSSSPERLVRAAVDLVDHPGARAAELQVRAGLAYGTVLA HHHHCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEE LNGDYFGNPVNLAARLVAAAAPGQILAAAQLRDMLPDWPALAHGPLTLKGFDAPVMAFEL ECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEE HDNPRARDADTPSPAASD CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYDSLDFDALEAAGIANPRERAGLLTYLDELGFTVEEMVQAERRGRLFGLAGDVLLWSGP CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCEEEECCC PIYTLATAADELGLSADDVARAWSLLGLTVAGPDVPTLSQADVDALATWVALKALVGEDG CCEEEEHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC AFGLLRVLGTAMARLAEAESTMIRAGSPNIQMTHTHDELATARAYRAAAEFVPRIGALID HHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH TVHRHHLASARTYFEGVIGDTSASVTCGIGFADLSSFTALTQALTPAQLQDLLTEFDAAV HHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TDVVHADGGRLVKFIGDAVMWVSSSPERLVRAAVDLVDHPGARAAELQVRAGLAYGTVLA HHHHCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEE LNGDYFGNPVNLAARLVAAAAPGQILAAAQLRDMLPDWPALAHGPLTLKGFDAPVMAFEL ECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEE HDNPRARDADTPSPAASD CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036