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The map label for this gene is yadR [C]

Identifier: 121638085

GI number: 121638085

Start: 2447575

End: 2447931

Strand: Reverse

Name: yadR [C]

Synonym: BCG_2220c

Alternate gene names: 121638085

Gene position: 2447931-2447575 (Counterclockwise)

Preceding gene: 121638086

Following gene: 121638083

Centisome position: 55.96

GC content: 62.46

Gene sequence:

>357_bases
ATGACGGTGCAGAACGAGCCGAGCGCCAAGACCCACGGCGTGATCCTGACCGAAGCGGCCGCCGCCAAGGCGAAGTCGCT
GTTGGACCAGGAGGGACGGGACGATCTGGCGCTGCGGATCGCGGTTCAGCCGGGGGGGTGCGCTGGATTGCGCTATAACC
TTTTCTTCGACGACCGGACGCTGGATGGTGACCAAACCGCGGAGTTCGGTGGTGTCAGGTTGATCGTGGACCGGATGAGC
GCGCCGTATGTGGAAGGCGCGTCGATCGATTTCGTCGACACTATTGAGAAGCAAGGCTTCACCATCGACAATCCCAACGC
CACCGGCTCCTGCGCGTGCGGGGATTCGTTCAACTGA

Upstream 100 bases:

>100_bases
AGGAAGTGGGATTTTCCCCAAGCAGACCCCAGACTGGATTCCGCAGGCTGAAACGCTAGTGGGCGGGGCCCACCCAACGA
TGAGACATCTAGGAGAAGTC

Downstream 100 bases:

>100_bases
TAAAACGCTAGTACGACCCCGCGGTGCGCAACACGTACGAGCACACCAAGACCTGACCGCGCTGGAAAAGCAACTGAGCG
ATGCCTTGCACCTGACCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTVQNEPSAKTHGVILTEAAAAKAKSLLDQEGRDDLALRIAVQPGGCAGLRYNLFFDDRTLDGDQTAEFGGVRLIVDRMS
APYVEGASIDFVDTIEKQGFTIDNPNATGSCACGDSFN

Sequences:

>Translated_118_residues
MTVQNEPSAKTHGVILTEAAAAKAKSLLDQEGRDDLALRIAVQPGGCAGLRYNLFFDDRTLDGDQTAEFGGVRLIVDRMS
APYVEGASIDFVDTIEKQGFTIDNPNATGSCACGDSFN
>Mature_117_residues
TVQNEPSAKTHGVILTEAAAAKAKSLLDQEGRDDLALRIAVQPGGCAGLRYNLFFDDRTLDGDQTAEFGGVRLIVDRMSA
PYVEGASIDFVDTIEKQGFTIDNPNATGSCACGDSFN

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family

Homologues:

Organism=Homo sapiens, GI52426768, Length=105, Percent_Identity=31.4285714285714, Blast_Score=66, Evalue=5e-12,
Organism=Homo sapiens, GI160420328, Length=82, Percent_Identity=37.8048780487805, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786351, Length=103, Percent_Identity=44.6601941747573, Blast_Score=97, Evalue=3e-22,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=35.2380952380952, Blast_Score=73, Evalue=5e-15,
Organism=Escherichia coli, GI1787974, Length=107, Percent_Identity=34.5794392523364, Blast_Score=60, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71998452, Length=107, Percent_Identity=33.6448598130841, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24642263, Length=106, Percent_Identity=33.0188679245283, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2204_MYCTU (P0A5A9)

Other databases:

- EMBL:   BX842579
- EMBL:   AE000516
- PIR:   E70785
- RefSeq:   NP_216720.1
- RefSeq:   NP_336732.1
- ProteinModelPortal:   P0A5A9
- SMR:   P0A5A9
- EnsemblBacteria:   EBMYCT00000003149
- EnsemblBacteria:   EBMYCT00000070857
- GeneID:   888428
- GeneID:   924166
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2260
- KEGG:   mtu:Rv2204c
- TIGR:   MT2260
- TubercuList:   Rv2204c
- GeneTree:   EBGT00050000015736
- HOGENOM:   HBG730174
- OMA:   VTMESNG
- ProtClustDB:   CLSK791700
- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870
- Gene3D:   G3DSA:2.60.300.12
- PANTHER:   PTHR10072
- TIGRFAMs:   TIGR00049

Pfam domain/function: PF01521 Fe-S_biosyn; SSF89360 HesB_yadR_yfhF-like

EC number: NA

Molecular weight: Translated: 12544; Mature: 12413

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQNEPSAKTHGVILTEAAAAKAKSLLDQEGRDDLALRIAVQPGGCAGLRYNLFFDDRT
CCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCC
LDGDQTAEFGGVRLIVDRMSAPYVEGASIDFVDTIEKQGFTIDNPNATGSCACGDSFN
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCEECCCCCCC
>Mature Secondary Structure 
TVQNEPSAKTHGVILTEAAAAKAKSLLDQEGRDDLALRIAVQPGGCAGLRYNLFFDDRT
CCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCC
LDGDQTAEFGGVRLIVDRMSAPYVEGASIDFVDTIEKQGFTIDNPNATGSCACGDSFN
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 11681203