Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638007
Identifier: 121638007
GI number: 121638007
Start: 2366303
End: 2367181
Strand: Direct
Name: 121638007
Synonym: BCG_2142
Alternate gene names: NA
Gene position: 2366303-2367181 (Clockwise)
Preceding gene: 121638005
Following gene: 121638009
Centisome position: 54.09
GC content: 68.49
Gene sequence:
>879_bases GTGACCCCATCGGAGGGCAACGCACCGCTGCCCGAACTGCACAACACCGTCGTCGTGGCTGCGTTCGAGGGCTGGAACGA CGCCGGCGACGCGGCCAGCGATGCCGTGGCACACCTGGCGGCCAGCTGGCAAGCACTGCCGATTGTCGAGATCGATGACG AGGCCTACTACGACTACCAGGTCAATCGGCCGGTCATCCGCCAAGTCGATGGGGTTACCCGGGAACTGCAGTGGCCGGCC ATGCGGATCTCGCACTGCCGCCCACCCGGCAGCGACCGCGACGTGGTGTTGATGTGCGGGGTGGAGCCGAATATGCGCTG GCGCACGTTTTGCGACGAGTTGCTGGCGGTCATCGACAAACTCAACGTGGACACCGTGGTGATCCTGGGGGCGCTGCTGG CCGACACCCCACACACCCGGCCGGTGCCGGTCTCGGGCGCGGCCTACTCCGCGGCGTCGGCGCGGCAGTTCGGCCTTCAA GAAACACGCTACGAGGGCCCCACCGGCATCGCCGGCGTCTTCCAATCTGCCTGTGTGGGGGCCGGCATCCCGGCGGTGAC GTTTTGGGCGGCGGTGCCGCACTATGTGTCGCACCCACCGAACCCGAAGGCGACGATTGCGTTGCTGCGCCGGGTCGAGG ACGTGCTCGACGTCGAGGTGCCGTTGGCGGACCTGCCCGCACAGGCCGAAGCGTGGGAGCGCGAGATCACCGAGACGATC GCCGAAGATCACGAGCTGGCCGAGTACGTGCAGACGCTGGAACAGCACGGCGACGCCGCGGTGGACATGAACGAGGCTCT CGGCAACATCGACGGCGACGCGCTGGCCGCCGAGTTCGAGCGCTATCTGCGCCGGCGCCGCCCGGGGTTCGGGCGCTAG
Upstream 100 bases:
>100_bases CCTCAGCGCGACAAAGCGTGGCCATCGCTACTAGCCGGGCCGCCTCAGACGACGTGCACGGTTCGCATCGTCGCCCGGGT GGACGCCGTAGGCTGACCAG
Downstream 100 bases:
>100_bases AGGGAGGTTGCGCTGCGGCGGACGACGGTGTCAGCCGGGCGGCCCAGGATCGCCGGAATCACCCTGAGTGCCCGGAGCGC CGGCTTTGCCGGGATTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTPSEGNAPLPELHNTVVVAAFEGWNDAGDAASDAVAHLAASWQALPIVEIDDEAYYDYQVNRPVIRQVDGVTRELQWPA MRISHCRPPGSDRDVVLMCGVEPNMRWRTFCDELLAVIDKLNVDTVVILGALLADTPHTRPVPVSGAAYSAASARQFGLQ ETRYEGPTGIAGVFQSACVGAGIPAVTFWAAVPHYVSHPPNPKATIALLRRVEDVLDVEVPLADLPAQAEAWEREITETI AEDHELAEYVQTLEQHGDAAVDMNEALGNIDGDALAAEFERYLRRRRPGFGR
Sequences:
>Translated_292_residues MTPSEGNAPLPELHNTVVVAAFEGWNDAGDAASDAVAHLAASWQALPIVEIDDEAYYDYQVNRPVIRQVDGVTRELQWPA MRISHCRPPGSDRDVVLMCGVEPNMRWRTFCDELLAVIDKLNVDTVVILGALLADTPHTRPVPVSGAAYSAASARQFGLQ ETRYEGPTGIAGVFQSACVGAGIPAVTFWAAVPHYVSHPPNPKATIALLRRVEDVLDVEVPLADLPAQAEAWEREITETI AEDHELAEYVQTLEQHGDAAVDMNEALGNIDGDALAAEFERYLRRRRPGFGR >Mature_291_residues TPSEGNAPLPELHNTVVVAAFEGWNDAGDAASDAVAHLAASWQALPIVEIDDEAYYDYQVNRPVIRQVDGVTRELQWPAM RISHCRPPGSDRDVVLMCGVEPNMRWRTFCDELLAVIDKLNVDTVVILGALLADTPHTRPVPVSGAAYSAASARQFGLQE TRYEGPTGIAGVFQSACVGAGIPAVTFWAAVPHYVSHPPNPKATIALLRRVEDVLDVEVPLADLPAQAEAWEREITETIA EDHELAEYVQTLEQHGDAAVDMNEALGNIDGDALAAEFERYLRRRRPGFGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31871; Mature: 31740
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSEGNAPLPELHNTVVVAAFEGWNDAGDAASDAVAHLAASWQALPIVEIDDEAYYDYQ CCCCCCCCCCCHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEE VNRPVIRQVDGVTRELQWPAMRISHCRPPGSDRDVVLMCGVEPNMRWRTFCDELLAVIDK CCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH LNVDTVVILGALLADTPHTRPVPVSGAAYSAASARQFGLQETRYEGPTGIAGVFQSACVG CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHC AGIPAVTFWAAVPHYVSHPPNPKATIALLRRVEDVLDVEVPLADLPAQAEAWEREITETI CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHH AEDHELAEYVQTLEQHGDAAVDMNEALGNIDGDALAAEFERYLRRRRPGFGR HHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPSEGNAPLPELHNTVVVAAFEGWNDAGDAASDAVAHLAASWQALPIVEIDDEAYYDYQ CCCCCCCCCCHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEE VNRPVIRQVDGVTRELQWPAMRISHCRPPGSDRDVVLMCGVEPNMRWRTFCDELLAVIDK CCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH LNVDTVVILGALLADTPHTRPVPVSGAAYSAASARQFGLQETRYEGPTGIAGVFQSACVG CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHC AGIPAVTFWAAVPHYVSHPPNPKATIALLRRVEDVLDVEVPLADLPAQAEAWEREITETI CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHH AEDHELAEYVQTLEQHGDAAVDMNEALGNIDGDALAAEFERYLRRRRPGFGR HHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA