Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is yesQ [H]
Identifier: 121637925
GI number: 121637925
Start: 2268451
End: 2269293
Strand: Reverse
Name: yesQ [H]
Synonym: BCG_2058c
Alternate gene names: 121637925
Gene position: 2269293-2268451 (Counterclockwise)
Preceding gene: 121637926
Following gene: 121637924
Centisome position: 51.88
GC content: 62.04
Gene sequence:
>843_bases GTGGGCTGGGCTGATCGAATAGTCCACCGCCACTTCATTCGTGGGCTTGCCCTGTACGCGGGACTGATCGGGATCGCTTG GTGCGCGCTGTTCCCTATCATCTGGGCGCTGTCGGGCTCCCTGAAGGCGGACGGCGAGGTGACCGAGCCGACGCTGTTCC CGTCGCATCCGCAATGGTCCAACTACCGCGAGGTGTTCGCGTTGATGCCGTTCTGGCGGATGTTCTTCAACACCGTGCTG TATGCCGGATGTGTCACCGCCGGGCAGGTCTTCTTCTGCTCGTTGGCCGGTTATGCCTTCGCGCGACTGCAGTTCCGGGG CCGCGATACGTTGTTCGTCTTGTACTTGAGCACTTTGATGGTGCCGTTGACGGTGACCGTCATCCCACAGTTCATTCTCA TGCGGATCGTGGGGTGGGTGGATACGCCGTGGGCGATGATCGTGCCGGGATTGTTCGGTAGCGCGTTCGGTACCTACCTG ATGCGGCAGTTCTTCCGCACGCTGCCGACCGATCTCGAGGAAGCCGCGATTCTCGACGGTTGCTCGCCGTGGCAGATCTA CTGGCGGATTCTGCTGCCGCATTCACGTCCCGCGGTGCTGGTGCTGGGTGTGCTCACCTGGGTCAACGTGTGGAACGACT TTCTGTGGCCGCTGCTGATGATCCAGCGAAACAGCCTGGCGACGCTCACCCTTGGCCTGGTCCGATTGCGGGGCGAATAC GTCGCCCGGTGGCCGGTGCTGATGGCGGCGTCGATGCTGATGCTGGTGCCGTTGGTCATCCTTTATGCGGTCGCACAACG TTCCTTTGTCCGTGGTATCGCGGTGACTGGGCTCGGCGGGTAA
Upstream 100 bases:
>100_bases GGCTATGCGTCCGCGTTGGCGTGGGTGATGTTCGCCATCTTGCTGGTGTTGACCGTGCTGCAGTTGCGAATTACGCACCG GCGCTCCTGGGAGGCGTCCC
Downstream 100 bases:
>100_bases CCATGGCTTCGGTGAGTTTTGAGCAGGCAACCCGGCGCTATCCCGGCACGGACCGACCGGCCCTGGATCGGCTCGACCTG ATCGTCGGCGATGGCGAGTT
Product: putative sugar-transport integral membrane protein ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MGWADRIVHRHFIRGLALYAGLIGIAWCALFPIIWALSGSLKADGEVTEPTLFPSHPQWSNYREVFALMPFWRMFFNTVL YAGCVTAGQVFFCSLAGYAFARLQFRGRDTLFVLYLSTLMVPLTVTVIPQFILMRIVGWVDTPWAMIVPGLFGSAFGTYL MRQFFRTLPTDLEEAAILDGCSPWQIYWRILLPHSRPAVLVLGVLTWVNVWNDFLWPLLMIQRNSLATLTLGLVRLRGEY VARWPVLMAASMLMLVPLVILYAVAQRSFVRGIAVTGLGG
Sequences:
>Translated_280_residues MGWADRIVHRHFIRGLALYAGLIGIAWCALFPIIWALSGSLKADGEVTEPTLFPSHPQWSNYREVFALMPFWRMFFNTVL YAGCVTAGQVFFCSLAGYAFARLQFRGRDTLFVLYLSTLMVPLTVTVIPQFILMRIVGWVDTPWAMIVPGLFGSAFGTYL MRQFFRTLPTDLEEAAILDGCSPWQIYWRILLPHSRPAVLVLGVLTWVNVWNDFLWPLLMIQRNSLATLTLGLVRLRGEY VARWPVLMAASMLMLVPLVILYAVAQRSFVRGIAVTGLGG >Mature_279_residues GWADRIVHRHFIRGLALYAGLIGIAWCALFPIIWALSGSLKADGEVTEPTLFPSHPQWSNYREVFALMPFWRMFFNTVLY AGCVTAGQVFFCSLAGYAFARLQFRGRDTLFVLYLSTLMVPLTVTVIPQFILMRIVGWVDTPWAMIVPGLFGSAFGTYLM RQFFRTLPTDLEEAAILDGCSPWQIYWRILLPHSRPAVLVLGVLTWVNVWNDFLWPLLMIQRNSLATLTLGLVRLRGEYV ARWPVLMAASMLMLVPLVILYAVAQRSFVRGIAVTGLGG
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789860, Length=262, Percent_Identity=33.587786259542, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1787571, Length=277, Percent_Identity=28.8808664259928, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1790464, Length=270, Percent_Identity=25.9259259259259, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31656; Mature: 31525
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWADRIVHRHFIRGLALYAGLIGIAWCALFPIIWALSGSLKADGEVTEPTLFPSHPQWS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC NYREVFALMPFWRMFFNTVLYAGCVTAGQVFFCSLAGYAFARLQFRGRDTLFVLYLSTLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH VPLTVTVIPQFILMRIVGWVDTPWAMIVPGLFGSAFGTYLMRQFFRTLPTDLEEAAILDG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC CSPWQIYWRILLPHSRPAVLVLGVLTWVNVWNDFLWPLLMIQRNSLATLTLGLVRLRGEY CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VARWPVLMAASMLMLVPLVILYAVAQRSFVRGIAVTGLGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GWADRIVHRHFIRGLALYAGLIGIAWCALFPIIWALSGSLKADGEVTEPTLFPSHPQWS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC NYREVFALMPFWRMFFNTVLYAGCVTAGQVFFCSLAGYAFARLQFRGRDTLFVLYLSTLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH VPLTVTVIPQFILMRIVGWVDTPWAMIVPGLFGSAFGTYLMRQFFRTLPTDLEEAAILDG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC CSPWQIYWRILLPHSRPAVLVLGVLTWVNVWNDFLWPLLMIQRNSLATLTLGLVRLRGEY CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VARWPVLMAASMLMLVPLVILYAVAQRSFVRGIAVTGLGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]