Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is yesP [H]
Identifier: 121637926
GI number: 121637926
Start: 2269280
End: 2270182
Strand: Reverse
Name: yesP [H]
Synonym: BCG_2059c
Alternate gene names: 121637926
Gene position: 2270182-2269280 (Counterclockwise)
Preceding gene: 121637927
Following gene: 121637925
Centisome position: 51.9
GC content: 59.36
Gene sequence:
>903_bases ATGACACGGCGCAGGGGGCGACGCGCGTGGGCGGGGCGTATGTTCGTCGCGCCGAACTTGGCTGCCGTTGTGGTGTTCAT GCTGTTTCCGCTGGGATTCTCGCTGTACATGAGCTTTCAGAAGTGGGACTTGTTTACGCATGCGACGTTCGTGAGGTTGG ACAATTTCAGAAACCTCTTCACTTCTGATCCGCTGTTTCTCATCGCCGTGGTCAACACCGCGGTTTACACCGTCGGCACC GTGGTACCGACCGTTATCGTCAGCCTCGTCGTCGCCGCCTTTCTAAACCGGAAAATCAAAGGCATCAGCCTCTTTCGGAC GGTCGTCTTCTTGCCGTTGGCGATTTCCTCGGTGGTGATGGCGGTCGTCTGGCAGTTCGTCTTCAACACCGACAATGGCC TACTCAACATCATGCTCGGCTGGCTGGGAATCGGCCCCATCCCATGGCTAATCGAACCCCGATGGGCCATGGTCTCGCTT TGCCTGGTCAGCGTCTGGCGCAGTGTGCCCTTCGCCACGGTCGTCCTGCTGGCCGCGATGCAGGGGGTTCCGGAGACTGT GTACGAGGCGGCCAGGATCGATGGTGCCGGCGAGATTCGCCAGTTCGTGTCCATCACGGTACCGCTGATCCGGGGGGCAT TGTCATTCGTGGTTGTCATATCGATCATCCACGCGTTCCAGGCGTTTGACCTTGTCTACGTCCTTACCGGTGCCAACGGT GGTCCCGAGACGGCTACCTATGTTTTGGGCATCATGCTGTTCCAGCACGCGTTTTCGTTCCTGGAATTCGGCTATGCGTC CGCGTTGGCGTGGGTGATGTTCGCCATCTTGCTGGTGTTGACCGTGCTGCAGTTGCGAATTACGCACCGGCGCTCCTGGG AGGCGTCCCGTGGGCTGGGCTGA
Upstream 100 bases:
>100_bases CCCTGATGGACCGCTACTTCGGACCCGTGCTGCGTGGATCCCGGCCGGCGACCTCGCTGACCGGGCTATCACAGGCCGTC GATGAAGTGCTGCGCAATCC
Downstream 100 bases:
>100_bases TCGAATAGTCCACCGCCACTTCATTCGTGGGCTTGCCCTGTACGCGGGACTGATCGGGATCGCTTGGTGCGCGCTGTTCC CTATCATCTGGGCGCTGTCG
Product: putative sugar-transport integral membrane protein ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAVVNTAVYTVGT VVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSL CLVSVWRSVPFATVVLLAAMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG
Sequences:
>Translated_300_residues MTRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAVVNTAVYTVGT VVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSL CLVSVWRSVPFATVVLLAAMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG >Mature_299_residues TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAVVNTAVYTVGTV VPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLC LVSVWRSVPFATVVLLAAMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG PETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=8e-33, Organism=Escherichia coli, GI1787570, Length=244, Percent_Identity=30.7377049180328, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1790465, Length=253, Percent_Identity=29.2490118577075, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33327; Mature: 33196
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLF CCCCCCCHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM HHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHCHHHHHHHHHHH QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLF CCCCCCHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM HHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHCHHHHHHHHHHH QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]